Evidence map›Paper›PMID 24737316›Full record

ArticleThe Journal of biological chemistry2014

Structural basis of pharmacological chaperoning for human β-galactosidase.

Hironori Suzuki, Umeharu Ohto, Katsumi Higaki, Teresa Mena-Barragán, Matilde Aguilar-Moncayo, Carmen Ortiz Mellet, Eiji Nanba, Jose M Garcia Fernandez, Yoshiyuki Suzuki, Toshiyuki Shimizu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. spJournal of enzyme inhibition and medicinal chemistry · 2022
    Article
  4. Design and synthesis of biologically active carbaglycosylamines: From glycosidase inhibitors to pharmacological chaperones.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2022
    Review
  5. Review
  6. Article
  7. Article
  8. A Pharmacological Chaperone Therapy for Acute Intermittent Porphyria.Molecular therapy : the journal of the American Society of Gene Therapy · 2020
    Article
  9. Article
  10. Article
  11. Review
  12. Chain-Branched Polyhydroxylated Octahydro-Pharmaceuticals (Basel, Switzerland) · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Emerging novel concept of chaperone therapies for protein misfolding diseases.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Hironori SuzukiFrom the Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.
Umeharu OhtoFrom the Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.
Katsumi Higakithe Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University, 86 Nishi-cho, Yonago, Tottori 683-8503, Japan.
Teresa Mena-Barragánthe Department of Organic Chemistry, Faculty of Chemistry, University of Seville, Profesor García González 1, E-41012 Seville, Spain.
Matilde Aguilar-Moncayothe Department of Organic Chemistry, Faculty of Chemistry, University of Seville, Profesor García González 1, E-41012 Seville, Spain.
Carmen Ortiz Melletthe Department of Organic Chemistry, Faculty of Chemistry, University of Seville, Profesor García González 1, E-41012 Seville, Spain.
Eiji Nanbathe Division of Functional Genomics, Research Center for Bioscience and Technology, Tottori University, 86 Nishi-cho, Yonago, Tottori 683-8503, Japan.
Jose M Garcia Fernandezthe Institute for Chemical Research (IIQ), CSIC, University of Sevilla, Americo Vespucio 49, Isla de la Cartuja, E-41092 Sevilla, Spain.
Yoshiyuki Suzukithe International University of Health and Welfare Graduate School, Kita Kanemaru, Otawara, Tochigi 324-8501, Japan, and.
Toshiyuki ShimizuFrom the Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan, CREST, Japan Science and Technology Agency, 4-1-8 Honcho Kawaguchi, Saitama 332-0012, Japan shimizu@mol.f.u-tokyo.ac.jp.
Universidad de Sevilla · ESThe University of Tokyo · JPTottori University · JPInstituto de Investigaciones Químicas · ESInternational University of Health and Welfare · JPJapan Science and Technology Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GM1 gangliosidosis and Morquio B disease are autosomal recessive diseases caused by the defect in the lysosomal β-galactosidase (β-Gal), frequently related to misfolding and subsequent endoplasmic reticulum-associated degradation. Pharmacological chaperone (PC) therapy is a newly developed molecular therapeutic approach by using small molecule ligands of the mutant enzyme that are able to promote the correct folding and prevent endoplasmic reticulum-associated degradation and promote trafficking to the lysosome. In this report, we describe the enzymological properties of purified recombinant human β-Gal(WT) and two representative mutations in GM1 gangliosidosis Japanese patients, β-Gal(R201C) and β-Gal(I51T). We have also evaluated the PC effect of two competitive inhibitors of β-Gal. Moreover, we provide a detailed atomic view of the recognition mechanism of these compounds in comparison with two structurally related analogues. All compounds bind to the active site of β-Gal with the sugar-mimicking moiety making hydrogen bonds to active site residues. Moreover, the binding affinity, the enzyme selectivity, and the PC potential are strongly affected by the mono- or bicyclic structure of the core as well as the orientation, nature, and length of the exocyclic substituent. These results provide understanding on the mechanism of action of β-Gal selective chaperoning by newly developed PC compounds.

Indexed as

1-Deoxynojirimycinbeta-GalactosidaseCatalytic DomainCrystallography, X-RayCyclohexenesEnzyme InhibitorsEnzyme StabilityGangliosidosis, GM1HexosaminesHumansHydrogen BondingHydrogen-Ion ConcentrationImino SugarsInositolKineticsModels, Molecular1-Deoxynojirimycinbeta-GalactosidaseCyclohexenesEnzyme InhibitorsHexosaminesImino SugarsInositolN-octyl-beta-valienaminenojirimycinproto-quercitolvalienamineCrystal StructureGalactoseGlycosidasesLysosomal Storage DiseaseX-ray Crystallography

Identifiers

PMID24737316
PMCPMC4031513
OpenAlexW2087861209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.