Evidence map›Paper›PMID 24735877›Full record

ArticleDevelopmental cell2014

Rif1 maintains telomere length homeostasis of ESCs by mediating heterochromatin silencing.

Jiameng Dan, Yifei Liu, Na Liu, Maria Chiourea, Maja Okuka, Tao Wu, Xiaoying Ye, Chunlin Mou, Lei Wang, Lingling Wang and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 133 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Repetitive Sequence Stability in Embryonic Stem Cells.International journal of molecular sciences · 2024
    Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 3 countries.

Jiameng DanState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Yifei LiuYale Stem Cell Center and Department of Genetics, Yale University School of Medicine, New Haven, CT 06519, USA.
Na LiuState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Maria ChioureaLaboratory of Genetics, Center of Basic Research II, Biomedical Research Foundation of the Academy of Athens Greece (BRFAA), Soranou Efesiou 4, Athens 11527, Greece.
Maja OkukaDepartment of Obstetrics and Gynecology, University of South Florida College of Medicine, Tampa, FL 33612, USA.
Tao WuYale Stem Cell Center and Department of Genetics, Yale University School of Medicine, New Haven, CT 06519, USA.
Xiaoying YeState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Chunlin MouState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Lei WangState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Lingling WangState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Yu YinState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Jihong YuanState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Bingfeng ZuoState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Fang WangState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Zhiguo LiState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Xinghua PanYale Stem Cell Center and Department of Genetics, Yale University School of Medicine, New Haven, CT 06519, USA.
Zhinan YinState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
Lingyi ChenState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China.
David L KeefeDepartment of Obstetrics and Gynecology, New York University Langone Medical Center, New York, NY 10016, USA.
Sarantis GagosLaboratory of Genetics, Center of Basic Research II, Biomedical Research Foundation of the Academy of Athens Greece (BRFAA), Soranou Efesiou 4, Athens 11527, Greece.
Andrew XiaoYale Stem Cell Center and Department of Genetics, Yale University School of Medicine, New Haven, CT 06519, USA. Electronic address: andrew.xiao@yale.edu.
Lin LiuState Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, Tianjin 300071, China. Electronic address: liulin@nankai.edu.cn.
State Key Laboratory of Medicinal Chemical BiologyNankai University · CNBiomedical Research Foundation of the Academy of Athens · GRYale Cancer Center · USYale University · USFlorida College · USNYU Langone Health · US

Funding

Project 3: Effect of Age and Longevity Genes on Epigenomic MechanismsP01GM099130 · NIGMS · STANFORD UNIVERSITY · PI WEISSMAN, SHERMAN MORTON · 2011 to 2015
$11.4M
A novel enzymatic activity of WSTF and its role in tumorigenesisR00CA131560 · NCI · YALE UNIVERSITY · PI XIAO, ZHUO ANDREW · 2010 to 2012
$732k
NCI NIH HHS 5R00CA131560NCI NIH HHS R00 CA131560NIGMS NIH HHS P01 GM099130
6 · The paper itself

Abstract

Telomere length homeostasis is essential for genomic stability and unlimited self-renewal of embryonic stem cells (ESCs). We show that telomere-associated protein Rif1 is required to maintain telomere length homeostasis by negatively regulating Zscan4 expression, a critical factor for telomere elongation by recombination. Depletion of Rif1 results in terminal hyperrecombination, telomere length heterogeneity, and chromosomal fusions. Reduction of Zscan4 by shRNA significantly rescues telomere recombination defects of Rif1-depleted ESCs and associated embryonic lethality. Further, Rif1 negatively modulates Zscan4 expression by maintaining H3K9me3 levels at subtelomeric regions. Mechanistically, Rif1 interacts and stabilizes H3K9 methylation complex. Thus, Rif1 regulates telomere length homeostasis of ESCs by mediating heterochromatic silencing.

Indexed as

Gene SilencingTelomere HomeostasisAnimalsEmbryonic Stem CellsGene DeletionGene Expression Regulation, DevelopmentalHeterochromatinHistonesMethylationMiceProtein BindingProtein Processing, Post-TranslationalRecombination, GeneticRNA, MessengerTelomereTelomere-Binding ProteinsHeterochromatinHistonesRif1 protein, mouseRNA, MessengerTelomere-Binding ProteinsTranscription FactorsZscan4c protein, mouse

Identifiers

PMID24735877
PMCPMC4720134
OpenAlexW2045687891

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.