Evidence map›Paper›PMID 24735218›Full record

ArticleBiochemistry2014

Microbial tailoring of acyl peptidic siderophores.

Julia M Gauglitz, Akira Iinishi, Yusai Ito, Alison Butler

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Multiple siderophores: bug or feature?Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  6. Article
  7. Vibrio Iron Transport: Evolutionary Adaptation to Life in Multiple Environments.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

Julia M GauglitzDepartment of Chemistry and Biochemistry, University of California , Santa Barbara, California 93106-9510, United States.
Akira Iinishi
Yusai Ito
Alison Butler
University of California, Santa Barbara · US

Funding

THE BIOINORGANIC CHEMISTRY OF IRONR01GM038130 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI BUTLER, ALISON · 1994 to 2009
$1.9M
INVESTIGATIONS OF THE BIOCHEMISTRY OF VANADIUMR29GM038130 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI BUTLER, ALISON · 1988 to 1992
–
BIOCHEMISTRY OF VANADIUM AND IRONR55GM038130 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI BUTLER, ALISON · 1993 to 1993
–
NIGMS NIH HHS GM38130
6 · The paper itself

Abstract

Marine bacteria produce an abundance of suites of acylated siderophores characterized by a unique, species-dependent headgroup that binds iron(III) and one of a series of fatty acid appendages. Marinobacter sp. DS40M6 produces a suite of seven acylated marinobactins, with fatty acids ranging from saturated and unsaturated C12-C18 fatty acids. In the present study, we report that in the late log phase of growth, the fatty acids are hydrolyzed by an amide hydrolase producing the peptidic marinobactin headgroup. Halomonas aquamarina str. DS40M3, another marine bacterium isolated originally from the same sample of open ocean water as Marinobacter sp. DS40M6, produces the acyl aquachelins, also as a suite composed of a peptidic headgroup distinct from that of the marinobactins. In contrast to the acyl marinobactins, hydrolysis of the suite of acyl aquachelins is not detected, even when H. aquamarina str. DS40M3 is grown into the stationary phase. The Marinobacter cell-free extract containing the acyl amide hydrolase is active toward exogenous acyl-peptidic siderophores (e.g., aquachelin C, loihichelin C, as well as octanoyl homoserine lactone used in quorum sensing). Further, when H. aquamarina str. DS40M3 is cultured together with Marinobacter sp. DS40M6, the fatty acids of both suites of siderophores are hydrolyzed, and the aquachelin headgroup is also produced. The present study demonstrates that coculturing bacteria leads to metabolically tailored metabolites compared to growth in a single pure culture, which is interesting given the importance of siderophore-mediated iron acquisition for bacterial growth and that Marinobacter sp. DS40M6 and H. aquamarina str. DS40M3 were isolated from the same sample of seawater.

Indexed as

AmidohydrolasesBacteriological TechniquesCell-Free SystemCoculture TechniquesFatty Acid Amide HydrolasesHalomonasHydrolysisMagnetic Resonance SpectroscopyMarinobacterMolecular StructureOligopeptidesPalmitic AcidsPeptidesPeptides, CyclicSiderophoresTime FactorsAmidohydrolasesaquachelin-CFatty Acid Amide Hydrolasesloihichelin Cmarinobactin Amarinobactin EOligopeptidesPalmitic AcidsPeptidesPeptides, CyclicSiderophores

Identifiers

PMID24735218
PMCPMC4010258
OpenAlexW2331142502

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.