Evidence map›Paper›PMID 24734091›Full record

ArticleHepatitis monthly2014

The IFN-λ Genetic Polymorphism Association With the Viral Clearance Induced by Hepatitis C Virus Treatment in Pakistani Patients.

Imran Tipu, Fiona Marriage, Zia-Ur-Rahman Farooqi, Hazel Platt, Muhammad Amin Athar, Philip John Day, Andrea Short

Open access · bronzeAbstract read
In one paragraph

Article in Hepatitis monthly, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Prevalence ofWorld journal of gastroenterology · 2017
    Article
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  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Imran TipuInstitute of Biochemistry and Biotechnology, University of the Punjab, Lahore, Pakistan ; Manchester Institute of Biotechnology, University of Manchester, Manchester, UK.
Fiona MarriageManchester Institute of Biotechnology, University of Manchester, Manchester, UK ; Centre for Integrated Genomic Medical Research, University of Manchester, Manchester, UK.
Zia-Ur-Rahman FarooqiManchester Institute of Biotechnology, University of Manchester, Manchester, UK ; National University of Science and Technology, Islamabad, Pakistan.
Hazel PlattCentre for Integrated Genomic Medical Research, University of Manchester, Manchester, UK.
Muhammad Amin AtharInstitute of Biochemistry and Biotechnology, University of the Punjab, Lahore, Pakistan.
Philip John DayManchester Institute of Biotechnology, University of Manchester, Manchester, UK ; Centre for Integrated Genomic Medical Research, University of Manchester, Manchester, UK.
Andrea ShortCentre for Integrated Genomic Medical Research, University of Manchester, Manchester, UK.
University of Manchester · GBUniversity of the Punjab · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPolymorphisms in the interferon λ (INF λ) genes on chromosome 19 have been associated with clearance of hepatitis C virus (HCV) induced by interferon and ribavirin therapy however there is no such data available for Pakistani patients with HCV infection.

objectivesIn this study, the effects of single nucleotide polymorphisms (SNPs) have been investigated in response to treatment with interferon-α and ribavirin in a cohort of 75 HCV genotype 3a patients. PATIENTS AND

methodsA total number of 50 SNPs from the Interferon λ region on chromosome 19 were genotyped to investigate allelic associations with the treatment response in HCV type 3a patients. Thirteen SNPs were associated with HCV clearance, with the most significant alleles being RS8109886 (Fisher's P = 0.0001), RS8113007 (Fisher's P = 0.0001) and RS12979860 (Fisher's P = 0.0002).

resultsThese SNPs were found to be the most suitable SNPs for predicting treatment response in the present study. These findings support those reported previously. This could be used to improve HCV treatment strategies and suggest that Pakistani patients should be genotyped for the relevant SNPs to identify the patients who are more likely to respond to interferon and ribavirin therapy.

conclusionsThis therapy is costly and can be accompanied by several adverse side-effects, hence pre-treatment prediction of patients who are most likely to benefit would have both economic and patient benefits in the long term.

Indexed as

Antiviral AgentsHepacivirusInterferonsPolymorphism, GeneticPolymorphism, Single NucleotideRibavirin

Identifiers

PMID24734091
PMCPMC3984471
OpenAlexW2153028648

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.