ArticleJournal of applied genetics2014
Potential of Start Codon Targeted (SCoT) markers for DNA fingerprinting of newly synthesized tritordeums and their respective parents.
Article in Journal of applied genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.
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Who cites it
21 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.
- Traditional System Versus DNA Barcoding in Identification of Bamboo Species: A Systematic Review.Molecular biotechnology · 2021Pooled it
- Start codon targeted (SCoT) based molecular diversity and population structure analysis in black turmeric (Curcuma caesia Roxb.).BMC plant biology · 2026Article
- Article
- Induced genetic diversity through mutagenesis in wheat gene pool and significant use of SCoT markers to underpin key agronomic traits.BMC plant biology · 2024Article
- Micropropagation and Genetic Fidelity of Fegra Fig (Plants (Basel, Switzerland) · 2024Article
- Genetic marker: a genome mapping tool to decode genetic diversity of livestock animals.Frontiers in genetics · 2024Review
- Development of highly discriminatory SCoT- and CBDP-based SCAR fingerprint for authentication of Indian senna (Frontiers in plant science · 2024Article
- Genetic diversity analysis in wheat cultivars using SCoT and ISSR markers, chloroplast DNA barcoding and grain SEM.BMC plant biology · 2023Article
- ISSR and SCoT for evaluation of hereditary differences of 29 wild plants in Al Jubail Saudi Arabian.Saudi journal of biological sciences · 2022Article
- Tritordeum: Creating a New Crop Species-The Successful Use of Plant Genetic Resources.Plants (Basel, Switzerland) · 2021Review
- Phylogenetic relationships and DNA barcoding of nine endangered medicinal plant species endemic to Saint Katherine protectorate.Saudi journal of biological sciences · 2021Article
- Genetic characterization of Portuguese allochthonous populations ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- Genetic homogeneity revealed in micropropagatedPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- Indirect Regeneration and Assessment of Genetic Fidelity of Acclimated Plantlets by SCoT, ISSR, and RAPD Markers inBioMed research international · 2019Article
- Molecular insights of genetic variation in milk thistle (Silybum marianum [L.] Gaertn.) populations collected from southwest Iran.Molecular biology reports · 2018Article
- Molecular insights into genetic diversity and population dynamics of five medicinalPhysiology and molecular biology of plants : an international journal of functional plant biology · 2018Article
- Genomic restructuring in F1 Hordeum chilense × durum wheat hybrids and corresponding hexaploid tritordeum lines revealed by DNA fingerprinting analyses.Journal of genetics · 2017Article
- Hybrid identification and genetic variation ofHereditas · 2017Article
- Genetic relationship and diversity among coconut (Cocos nucifera L.) accessions revealed through SCoT analysis.3 Biotech · 2015Article
- Potential of Start Codon Targeted (SCoT) markers to estimate genetic diversity and relationships among Chinese Elymus sibiricus accessions.Molecules (Basel, Switzerland) · 2015Article
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Authors and funding
6 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Hexaploid tritordeum (H(ch)H(ch)AABB; 2n = 42) results from the cross between Hordeum chilense (H(ch)H(ch); 2n = 14) and cultivated durum wheat (Triticum turgidum ssp. durum (AABB; 2n = 28). Morphologically, tritordeum resembles the wheat parent, showing promise for agriculture and wheat breeding. Start Codon Targeted (SCoT) polymorphism is a recently developed technique that generates gene-targeted markers. Thus, we considered it interesting to evaluate its potential for the DNA fingerprinting of newly synthesized hexaploid tritordeums and their respective parents. In this study, 60 SCoT primers were tested, and 18 and 19 of them revealed SCoT polymorphisms in the newly synthesized tritordeum lines HT27 and HT22, respectively, and their parents. An analysis of the presence/absence of bands among tritordeums and their parents revealed three types of polymorphic markers: (i) shared by tritordeums and one of their parents, (ii) exclusively amplified in tritordeums, and (iii) exclusively amplified in the parents. No polymorphism was detected among individuals of each parental species. Three SCoT markers were exclusively amplified in tritordeums of lines HT22 and HT27, being considered as polyploidization-induced rearrangements. About 70% of the SCoT markers of H. chilense origin were not transmitted to the allopolyploids of both lines, and most of the SCoTs scored in the newly synthesized allopolyploids originated from wheat, reinforcing the potential use of tritordeum as an alternative crop.
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