Evidence map›Paper›PMID 24732754›Full record

ReviewBio Systems2014

HIV-associated neuropathogenesis: a systems biology perspective for modeling and therapy.

Susanna L Lamers, Gary B Fogel, David J Nolan, Michael S McGrath, Marco Salemi

Open access · greenAbstract readReview
In one paragraph

Review in Bio Systems, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Susanna L LamersBioinfoexperts, LLC, PO Box 693, Thibodaux, LA 70301, USA. Electronic address: susanna@bioinfox.com.
Gary B FogelNatural Selection, Inc., 5910 Pacific Center Blvd Suite 315, San Diego, CA 92121, USA. Electronic address: gfogel@natural-selection.com.
David J NolanUniversity of Florida, 2055 Mowry Road, Department of Pathology and Laboratory Medicine, Gainesville, FL 32610, USA. Electronic address: djnolan@ufl.edu.
Michael S McGrathUniversity of California, 1001 Potrero Avenue, Building 20, 4(th) Floor, Room 2407, San Francisco, CA 94110-3518, USA. Electronic address: mmcgrath@hemeonc.ucsf.edu.
Marco SalemiUniversity of Florida, 2055 Mowry Road, Department of Pathology and Laboratory Medicine, Gainesville, FL 32610, USA. Electronic address: salemi@pathology.ufl.edu.
University of Florida · USNatural Selection (United States) · USPotrero Medical (United States) · US

Funding

The Center for HIV RNA Studies (CRNA)P50GM103297 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAYIE, KWAKU · 2012 to 2016
$21.7M
Viral evolution in peropheral macrophages and brain during progression to AIDSR01NS063897 · NINDS · UNIVERSITY OF FLORIDA · PI SALEMI, MARCO · 2009 to 2021
$7.0M
Molecular Features of and Approach to the HIV CNS Reservoir Post cARTR01MH100984 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MCGRATH, MICHAEL SHANNON · 2013 to 2017
$1.9M
NIGMS NIH HHS P50 GM103297NIGMS NIH HHS P50 GM103297-01NIMH NIH HHS R01 MH100984NIMH NIH HHS R01 MH100984-01NINDS NIH HHS R01 NS063897NINDS NIH HHS R01 NS063897-01A2
6 · The paper itself

Abstract

Despite the development of powerful antiretroviral drugs, HIV-1 associated neurological disorders (HAND) will affect approximately half of those infected with HIV-1. Combined anti-retroviral therapy (cART) targets viral replication and increases T-cell counts, but it does not always control macrophage polarization, brain infection or inflammation. Moreover, it remains difficult to identify those at risk for HAND. New therapies that focus on modulating host immune response by making use of biological pathways could prove to be more effective than cART for the treatment of neuroAIDS. Additionally, while numerous HAND biomarkers have been suggested, they are of little use without methods for appropriate data integration and a systems-level interpretation. Machine learning, could be used to develop multifactorial computational models that provide clinicians and researchers with the ability to identify which factors (in what combination and relative importance) are considered important to outcome.

Indexed as

HIV-1Models, BiologicalArtificial IntelligenceBrainHIV InfectionsHumansMacrophagesNervous System DiseasesSystems BiologyBrainData integrationHIVMachine learningMacrophagesMicrogliamicroRNANeuropathogenesis

Identifiers

PMID24732754
PMCPMC4112533
OpenAlexW2013984019

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.