Evidence map›Paper›PMID 24727651›Full record

ArticleNature methods2014

Single-molecule analysis of cell surface dynamics in Caenorhabditis elegans embryos.

François B Robin, William M McFadden, Baixue Yao, Edwin M Munro

Abstract read
In one paragraph

Article in Nature methods, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. Article
  3. Asymmetric distribution of actin-related proteins in the earlybioRxiv : the preprint server for biology · 2026
    Article
  4. Actin network heterogeneity tunes activator-inhibitor dynamics at the cell cortex.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

François B RobinDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois, USA.
William M McFadden1] Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois, USA. [2] Biophysics Graduate Program, University of Chicago, Chicago, Illinois, USA.
Baixue YaoDepartment of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois, USA.
Edwin M Munro1] Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois, USA. [2] Institute for Biophysical Dynamics, University of Chicago, Chicago, Illinois, USA. [3] Computation Institute, University of Chicago, Chicago, Illinois, USA. [4].

Funding

Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
Graduate Program in Biophysical Sciences at the University of Chicago - Renewal 0T32EB009412 · NIBIB · UNIVERSITY OF CHICAGO · PI ENGEL, GREGORY S, SOSNICK, TOBIN R · 2009 to 2023
$4.9M
Dynamics and regulation of actomyosin contractility in the C. elegans embryoR01GM098441 · NIGMS · UNIVERSITY OF CHICAGO · PI MUNRO, EDWIN MARSHALL · 2011 to 2020
$2.9M
NCATS NIH HHS UL1 TR000430NIBIB NIH HHS T32 EB009412NIGMS NIH HHS R01 GM098441
6 · The paper itself

Abstract

We describe a general, versatile and minimally invasive method to image single molecules near the cell surface that can be applied to any GFP-tagged protein in Caenorhabditis elegans embryos. We exploited tunable expression via RNAi and a dynamically exchanging monomer pool to achieve fast, continuous single-molecule imaging at optimal densities with signal-to-noise ratios adequate for robust single-particle tracking (SPT). We introduce a method called smPReSS, single-molecule photobleaching relaxation to steady state, that infers exchange rates from quantitative analysis of single-molecule photobleaching kinetics without using SPT. Combining SPT and smPReSS allowed for spatially and temporally resolved measurements of protein mobility and exchange kinetics. We used these methods to (i) resolve distinct mobility states and spatial variation in exchange rates of the polarity protein PAR-6 and (ii) measure spatiotemporal modulation of actin filament assembly and disassembly. These methods offer a promising avenue to investigate dynamic mechanisms that pattern the embryonic cell surface.

Indexed as

Molecular ImagingAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEmbryo, NonmammalianGreen Fluorescent ProteinsSurface PropertiesCaenorhabditis elegans ProteinsGreen Fluorescent Proteinspar-6 protein, C elegans

Identifiers

PMID24727651
PMCPMC4046709

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.