Evidence map›Paper›PMID 24727473›Full record

ArticleThe Journal of biological chemistry2014

Multiple glycosaminoglycan-binding epitopes of monocyte chemoattractant protein-3/CCL7 enable it to function as a non-oligomerizing chemokine.

Catherina L Salanga, Douglas P Dyer, Janna G Kiselar, Sayan Gupta, Mark R Chance, Tracy M Handel

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Role of extracellular matrix proteoglycans in immune cell recruitment.International journal of experimental pathology · 2022
    Review
  14. Perspectives on the Biological Role of Chemokine:Glycosaminoglycan Interactions.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. The Role of Heparan Sulfate in Inflammation, and the Development of Biomimetics as Anti-Inflammatory Strategies.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Catherina L SalangaFrom the Skaggs School of Pharmacy and Pharmaceutical Science, University of California, San Diego, La Jolla, California 92093-0684 and.
Douglas P DyerFrom the Skaggs School of Pharmacy and Pharmaceutical Science, University of California, San Diego, La Jolla, California 92093-0684 and.
Janna G Kiselarthe Center for Proteomics and Bioinformatics and.
Sayan Guptathe Center for Proteomics and Bioinformatics and Center for Synchrotron Biosciences, Case Western Reserve University, Cleveland, Ohio 44106.
Mark R Chancethe Center for Proteomics and Bioinformatics and Center for Synchrotron Biosciences, Case Western Reserve University, Cleveland, Ohio 44106.
Tracy M HandelFrom the Skaggs School of Pharmacy and Pharmaceutical Science, University of California, San Diego, La Jolla, California 92093-0684 and thandel@ucsd.edu.
Case Western Reserve University · USUniversity of Montana · USUniversity of California, San Diego · US

Funding

Clinical and Translational Science Collaborative of ClevelandUL1TR000439 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$50.0M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
STRUCTURE OF MACROPHAGE CHEMOTACTIC ACTIVATING PROTEINSR01AI037113 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HANDEL, TRACY M · 1995 to 2015
$5.2M
Radiolytic Footprinting Methods for Structural Mass SpectrometryR01EB009688 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2010 to 2013
$1.1M
NCATS NIH HHS UL1 TR000439NIAID NIH HHS R01 AI037113NIAID NIH HHS R01 AI37113NIBIB NIH HHS P30 EB009998NIBIB NIH HHS P30 EB09688NIBIB NIH HHS P30-EB-09998NIBIB NIH HHS R01 EB009688NIBIB NIH HHS R01-EB-09688NIBIB NIH HHS R01 EB09998
6 · The paper itself

Abstract

The interaction of chemokines with glycosaminoglycans (GAGs) facilitates the formation of localized chemokine gradients that provide directional signals for migrating cells. In this study, we set out to understand the structural basis and impact of the differing oligomerization propensities of the chemokines monocyte chemoattractant protein (MCP)-1/CCL2 and MCP-3/CCL7 on their ability to bind GAGs. These chemokines provide a unique comparison set because CCL2 oligomerizes and oligomerization is required for its full in vivo activity, whereas CCL7 functions as a monomer. To identify the GAG-binding determinants of CCL7, an unbiased hydroxyl radical footprinting approach was employed, followed by a focused mutagenesis study. Compared with the size of the previously defined GAG-binding epitope of CCL2, CCL7 has a larger binding site, consisting of multiple epitopes distributed along its surface. Furthermore, surface plasmon resonance (SPR) studies indicate that CCL7 is able to bind GAGs with an affinity similar to CCL2 but higher than the non-oligomerizing variant, CCL2(P8A), suggesting that, in contrast to CCL2, the large cluster of GAG-binding residues in CCL7 renders oligomerization unnecessary for high affinity binding. However, the affinity of CCL7 is more sensitive than CCL2 to the density of heparan sulfate on the SPR surfaces; this is likely due to the inability of CCL7 to oligomerize because CCL2(P8A) also binds significantly less tightly to low than high density heparan sulfate surfaces compared with CCL2. Together, the data suggest that CCL7 and CCL2 are non-redundant chemokines and that GAG chain density may provide a mechanism for regulating the accumulation of chemokines on cell surfaces.

Indexed as

Amino Acid SequenceBinding SitesCell LineChemokine CCL2Chemokine CCL7Electrophoresis, Polyacrylamide GelEpitopesGlycosaminoglycansHumansMass SpectrometryModels, MolecularMolecular Sequence DataMutationProtein BindingProtein MultimerizationProtein Structure, TertiaryChemokine CCL2Chemokine CCL7EpitopesGlycosaminoglycansCCL2CCL7ChemokinesGlycosaminoglycanHydroxy Radical FootprintingMass Spectrometry (MS)Structural BiologySurface Plasmon Resonance (SPR)

Identifiers

PMID24727473
PMCPMC4031540
OpenAlexW2005146072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.