Evidence map›Paper›PMID 24727376›Full record

ArticleInternational journal of molecular sciences2014

DNA comet Giemsa staining for conventional bright-field microscopy.

Andreyan Osipov, Ekaterina Arkhangelskaya, Alexei Vinokurov, Nadezhda Smetaninа, Alex Zhavoronkov, Dmitry Klokov

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Andreyan OsipovState Research Center-Burnasyan Federal Medical Biophysical Center of Federal Medical Biological Agency (SRC-FMBC), 46, Zhivopisnaya Str., Moscow 123098, Russia. andreyan.osipov@gmail.com.
Ekaterina ArkhangelskayaState Research Center-Burnasyan Federal Medical Biophysical Center of Federal Medical Biological Agency (SRC-FMBC), 46, Zhivopisnaya Str., Moscow 123098, Russia. ek.arkhangelskaya@gmail.com.
Alexei VinokurovDima Rogachev Federal Research Center of Pediatric Hematology, Oncology and Immunology, 1, Samora Machel Str., Moscow 117997, Russia. a_vinokurov@inbox.ru.
Nadezhda SmetaninаState Research Center-Burnasyan Federal Medical Biophysical Center of Federal Medical Biological Agency (SRC-FMBC), 46, Zhivopisnaya Str., Moscow 123098, Russia. smetaninanm@gmail.com.
Alex ZhavoronkovDima Rogachev Federal Research Center of Pediatric Hematology, Oncology and Immunology, 1, Samora Machel Str., Moscow 117997, Russia. alex@biogerontology.org.
Dmitry KlokovChalk River Laboratories, Atomic Energy of Canada Limited, Stn 51 Plant Road, Chalk River, ON K0J1P0, Canada. klokovd@aecl.ca.
State Scientific Center of the Russian Federation - Federal Medical Biophysical Center named after A.I. Burnazyan · RUDmitry Rogachev National Research Center of Pediatric Hematology, Oncology and Immunology · RUAtomic Energy (Canada) · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study was undertaken to evaluate the compatibility of Giemsa staining protocol with the comet assay. We showed, for the first time, that DNA comets can be visualized and analyzed using Giemsa staining. We generated DNA damage dose response curves for human peripheral blood lymphocytes exposed to X-ray radiation using the comet assay with either SybrGreen I or Giemsa stain. The dose response curves were fitted by linear regressions (R2>0.977). The SybrGreen I results showed only ~1.2-fold higher slope coefficient (method sensitivity) compared to the Giemsa results. The unexpectedly high sensitivity of Giemsa staining for the comet assay is due to the Romanowsky-Giemsa effect, the stain photo-stability and the higher resolution of bright-field imaging compared to fluorescence imaging. Our results demonstrate that Giemsa staining can effectively be used for measuring DNA damage by the comet assay. The low cost and availability of Giemsa stain makes this method affordable for any low budget research and will facilitate new applications of the comet assay in biology and medicine.

Indexed as

MicroscopyAdultBenzothiazolesComet AssayDiaminesDNADNA DamageFemaleHumansLymphocytesOrganic ChemicalsQuinolinesX-RaysBenzothiazolesDiaminesDNAOrganic ChemicalsQuinolinesSYBR Green I

Identifiers

PMID24727376
PMCPMC4013617
OpenAlexW1970731381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.