Evidence map›Paper›PMID 24727325›Full record

Trial reportClinical cancer research : an official journal of the American Association for Cancer Research2014

Association study of the let-7 miRNA-complementary site variant in the 3' untranslated region of the KRAS gene in stage III colon cancer (NCCTG N0147 Clinical Trial).

Dan Sha, Adam M Lee, Qian Shi, Steven R Alberts, Daniel J Sargent, Frank A Sinicrope, Robert B Diasio

Open access · bronzeAbstract readClinical Trial, Phase IIIRandomized Controlled Trial
In one paragraph

Trial report in Clinical cancer research : an official journal of the American Association for Cancer Research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 40 citations in OpenAlex.

  1. Trial
  2. Prognostic role of the LCS6 KRAS variant in locally advanced rectal cancer: results of the EXPERT-C trial.Annals of oncology : official journal of the European Society for Medical Oncology · 2015
    Trial
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. New Insights Into Monogenic Causes of Osteoporosis.Frontiers in endocrinology · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Regulatory miRNAs in Colorectal Carcinogenesis and Metastasis.International journal of molecular sciences · 2017
    Review
  18. Article
  19. MicroRNAs: New Insight in Modulating Follicular Atresia: A Review.International journal of molecular sciences · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Dan ShaAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, ChinaAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Adam M LeeAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Qian ShiAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Steven R AlbertsAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Daniel J SargentAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Frank A SinicropeAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, ChinaAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China.
Robert B DiasioAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, ChinaAuthors' Affiliations: Department of Molecular Pharmacology and Experimental Therapeutics (MPET); Alliance Statistics and Data Center; Division of Medical Oncology; Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota; and Department of Medical Oncology, Shandong Provincial Hospital Affiliated to Shandong University, Ji'nan, Shandong Province, China Diasio.Robert@mayo.edu.
Digital Research Alliance of CanadaWinnMed · USMayo Clinic · USShandong Provincial Hospital · CN

Funding

CANCER AND LEUKEMIA GROUP B MINORITY SATELLITE SUPPLEMENU10CA031946 · NCI · UNIVERSITY OF CHICAGO · PI BERTAGNOLLI, MONICA M · 1985 to 2013
$158.4M
Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Felicity Enders · 1985 to 2026
$151.3M
SWOG - Foreign Accrual under UMiU10CA032102 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BLANKE, CHARLES D. · 1985 to 2013
$141.3M
ECOG OPERATIONS OFFICE (IBCSG)U10CA021115 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI COMIS, ROBERT L · 1985 to 2013
$132.6M
PRIMARY CANCER THERAPY GROUP--NSABP (HEADQUARTERS)U10CA012027 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WOLMARK, NORMAN · 1985 to 2012
$117.2M
NSABP Foreign AccrualsU10CA037377 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WOLMARK, NORMAN · 1985 to 2014
$116.5M
TRANSLATIONAL RESEARCHU10CA025224 · NCI · MAYO CLINIC ROCHESTER · PI BUCKNER, JAN C · 1985 to 2013
$85.0M
CANCER &LEUKEMIA GROUP B STATISTICAL CENTERU10CA033601 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SARGENT, DANIEL J. · 1985 to 2013
$69.4M
SUPPLEMENTU10CA037404 · NCI · MAYO CLINIC ROCHESTER · PI LOPRINZI, CHARLES L · 1985 to 2014
$34.8M
SIOUX COMMUNITY CANCER CONSORTIUMU10CA035103 · NCI · UNIVERSITY OF SOUTH DAKOTA · PI MAZURCZAK, MIROSLAW · 1985 to 2014
$11.6M
Illinois Oncology Research Association Community Clinical Oncology ProgramU10CA035113 · NCI · ONCOLOGY-HEMATOLOGY ASSOC-CENTRAL ILL · PI LE-LINDQWISTER, NGUYET A. · 1985 to 2014
$10.8M
Hawaii Minority-Based Clinical Community Oncology ProgramU10CA063844 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI BERENBERG, JEFFREY LEE · 1994 to 2014
$9.0M
NCI NIH HHS CA- 114740NCI NIH HHS CA12027NCI NIH HHS CA14028NCI NIH HHS CA21115NCI NIH HHS CA25224NCI NIH HHS CA31946NCI NIH HHS CA-32102NCI NIH HHS CA33601NCI NIH HHS CA35103NCI NIH HHS CA-35113NCI NIH HHS CA-3527 2NCI NIH HHS CA37377NCI NIH HHS CA37404NCI NIH HHS CA449957NCI NIH HHS K05 CA142885NCI NIH HHS K05CA-142885NCI NIH HHS N01 CA032102NCI NIH HHS N01 CA063844NCI NIH HHS P30 CA015083NCI NIH HHS U10 CA012027NCI NIH HHS U10 CA014028NCI NIH HHS U10 CA021115NCI NIH HHS U10 CA025224NCI NIH HHS U10 CA031946NCI NIH HHS U10 CA032102NCI NIH HHS U10 CA033601NCI NIH HHS U10 CA035103NCI NIH HHS U10 CA035113NCI NIH HHS U10 CA037377NCI NIH HHS U10 CA037404NCI NIH HHS U10 CA063844NCI NIH HHS U24 CA114740
6 · The paper itself

Abstract

purposeA let-7 microRNA-complementary site (LCS6) polymorphism in the 3' untranslated region of the KRAS gene has been shown to disrupt let-7 binding and upregulate KRAS expression. We evaluated the LCS6 genotype and its association with KRAS mutation status, clinicopathologic features, and disease-free survival (DFS) in patients with stage III colon cancer who enrolled in a phase III clinical trial (NCCTG N0147). EXPERIMENTAL

designThe LCS6 genotype was assayed by real-time PCR in DNA extracted from whole blood (n = 2,834) and compared with paired tumor tissue (n = 977). χ(2) and two-sample t tests were used to compare baseline factors and KRAS mutation status between patients defined by LCS6 variant status. Log-rank tests and multivariate Cox models assessed associations between LCS6 status and DFS, respectively.

resultsWe identified 432 (15.2%) blood samples and 143 (14.6%) tumor samples heterozygous or homozygous for the LCS6 G-allele, and 2,402 of 2,834 (84.8%) blood samples and 834 of 977 (85.4%) tumor samples homozygous for the LCS6 T-allele. Genotype results were highly concordant (99.8%) in cases with paired blood and tumor tissue (n = 977). G-allele carriers were significantly more frequent in Caucasians versus other races (χ(2) test, P < 0.0001). The LCS6 genotype was not associated with KRAS mutation status, clinicopathologic features (all P > 0.2), or DFS (log-rank P = 0.49; HR, 0.929; 95% confidence interval, 0.76-1.14), even after combining LCS6 genotype with KRAS mutation status.

conclusionsIn the largest association study investigating the LCS6 polymorphism in colon cancers, the germline LCS6 genotype was not associated with KRAS mutation status or with clinical outcome in patients with stage III tumors.

Indexed as

3' Untranslated RegionsAdolescentAdultAgedAged, 80 and overAntineoplastic Combined Chemotherapy ProtocolsBinding SitesColonic NeoplasmsFemaleFollow-Up StudiesGene Expression Regulation, NeoplasticHumansMaleMicroRNAsMiddle AgedMutation3' Untranslated RegionsKRAS protein, humanMicroRNAsmirnlet7 microRNA, humanProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)ras Proteins

Identifiers

PMID24727325
PMCPMC4084689
OpenAlexW2054173958

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.