Evidence map›Paper›PMID 24727228›Full record

ArticleJournal of bacteriology2014

The SdiA-regulated gene srgE encodes a type III secreted effector.

Fabien Habyarimana, Anice Sabag-Daigle, Brian M M Ahmer

Abstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Regulatory effects on virulence and phage susceptibility revealed byFrontiers in cellular and infection microbiology · 2025
    Article
  3. Review
  4. Review
  5. Review
  6. LuxR Solos in the Plant EndophyteApplied and environmental microbiology · 2020
    Article
  7. Review
  8. Anti-quorum sensing effects of licochalcone A and epigallocatechin-3-gallate againstVeterinary research forum : an international quarterly journal · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Fabien HabyarimanaDepartment of Microbial Infection and Immunity, The Ohio State University, Columbus, Ohio, USA Center for Microbial Interface Biology, The Ohio State University, Columbus, Ohio, USA.
Anice Sabag-DaigleDepartment of Microbial Infection and Immunity, The Ohio State University, Columbus, Ohio, USA Center for Microbial Interface Biology, The Ohio State University, Columbus, Ohio, USA.
Brian M M AhmerDepartment of Microbial Infection and Immunity, The Ohio State University, Columbus, Ohio, USA Center for Microbial Interface Biology, The Ohio State University, Columbus, Ohio, USA Department of Microbiology, The Ohio State University, Columbus, Ohio, USA ahmer.1@osu.edu.

Funding

Salmonella polymicrobial interactionsR01AI073971 · NIAID · OHIO STATE UNIVERSITY · PI AHMER, BRIAN M · 2008 to 2012
$2.8M
Coordination of metabolism and virulence during infectionR01AI097116 · NIAID · OHIO STATE UNIVERSITY · PI AHMER, BRIAN M, ROMEO, TONY · 2012 to 2016
$2.0M
Interdisciplinary Study of the Microbe-Host InterfaceT32AI065411 · NIAID · OHIO STATE UNIVERSITY · PI SCHLESINGER, LARRY S. · 2007 to 2011
$592k
NIAID NIH HHS 1-T32-AI065411NIAID NIH HHS R01 AI073971NIAID NIH HHS R01AI073971NIAID NIH HHS R01 AI097116NIAID NIH HHS R01AI097116NIAID NIH HHS T32 AI065411
6 · The paper itself

Abstract

Salmonella enterica serovar Typhimurium is a food-borne pathogen that causes severe gastroenteritis. The ability of Salmonella to cause disease depends on two type III secretion systems (T3SSs) encoded in two distinct Salmonella pathogenicity islands, 1 and 2 (SPI1 and SPI2, respectively). S. Typhimurium encodes a solo LuxR homolog, SdiA, which can detect the acyl-homoserine lactones (AHLs) produced by other bacteria and upregulate the rck operon and the srgE gene. SrgE is predicted to encode a protein of 488 residues with a coiled-coil domain between residues 345 and 382. In silico studies have provided conflicting predictions as to whether SrgE is a T3SS substrate. Therefore, in this work, we tested the hypothesis that SrgE is a T3SS effector by two methods, a β-lactamase activity assay and a split green fluorescent protein (GFP) complementation assay. SrgE with β-lactamase fused to residue 40, 100, 150, or 300 was indeed expressed and translocated into host cells, but SrgE with β-lactamase fused to residue 400 or 488 was not expressed, suggesting interference by the coiled-coil domain. Similarly, SrgE with GFP S11 fused to residue 300, but not to residue 488, was expressed and translocated into host cells. With both systems, translocation into host cells was dependent upon SPI2. A phylogenetic analysis indicated that srgE is found only within Salmonella enterica subspecies. It is found sporadically within both typhoidal and nontyphoidal serovars, although the SrgE protein sequences found within typhoidal serovars tend to cluster separately from those found in nontyphoidal serovars, suggesting functional diversification.

Indexed as

AnimalsBacterial ProteinsCell LineEscherichia coliGene Expression Regulation, BacterialMembrane ProteinsMicePhylogenyRecombinant ProteinsSalmonella typhimuriumTrans-ActivatorsBacterial ProteinsMembrane ProteinsRecombinant ProteinsSdiA protein, bacteriaSpi1 protein, SalmonellaSPI-2 protein, SalmonellaTrans-Activators

Identifiers

PMID24727228
PMCPMC4054179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.