Evidence map›Paper›PMID 24726953›Full record

ArticleMatrix biology : journal of the International Society for Matrix Biology2014

Fat depot-specific gene signature and ECM remodeling of Sca1(high) adipose-derived stem cells.

Masakuni Tokunaga, Mayumi Inoue, Yibin Jiang, Richard H Barnes, David A Buchner, Tae-Hwa Chun

Open access · greenAbstract read
In one paragraph

Article in Matrix biology : journal of the International Society for Matrix Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Single-cell RNA sequencing reveals the induction of novel myeloid and myeloid-associated cell populations in visceral fat with long-term obesity.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  10. Pathological Conversion of Mouse Perivascular Adipose Tissue by Notch Activation.Arteriosclerosis, thrombosis, and vascular biology · 2020
    Article
  11. Article
  12. Review
  13. Fat fibrosis: friend or foe?JCI insight · 2018
    Review
  14. Article
  15. Article
  16. Article
  17. The increasingly complex regulation of adipocyte differentiation.Experimental biology and medicine (Maywood, N.J.) · 2016
    Review
  18. Article
  19. Article
  20. Proinflammatory phenotype of perivascular adipocytes.Arteriosclerosis, thrombosis, and vascular biology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Masakuni TokunagaDepartment of Internal Medicine, Division of MEND, University of Michigan Medical School, United States.
Mayumi InoueDepartment of Internal Medicine, Division of MEND, University of Michigan Medical School, United States.
Yibin JiangDepartment of Internal Medicine, Division of MEND, University of Michigan Medical School, United States; Biointerfaces Institute, University of Michigan, United States.
Richard H BarnesDepartment of Internal Medicine, Division of MEND, University of Michigan Medical School, United States; Biointerfaces Institute, University of Michigan, United States.
David A BuchnerDepartment of Genetics and Genome Sciences, Case Western Reserve University, United States.
Tae-Hwa ChunDepartment of Internal Medicine, Division of MEND, University of Michigan Medical School, United States; Biointerfaces Institute, University of Michigan, United States. Electronic address: taehwa@med.umich.edu.
University of Michigan · USCase Western Reserve University · USDiabetes Australia · AU

Funding

Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DAVID P OLSON · 2013 to 2026
$24.3M
MMP14-dependent regulation of adipose tissue remodeling and function (R01)R01DK095137 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHUN, TAEHWA · 2012 to 2016
$1.7M
Cntnp2 in diet-induced obesityK01DK084079 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BUCHNER, DAVID A · 2010 to 2014
$741k
Role of Adipose MMP14 in Balancing Adiposity and AtherosclerosisR21HL106332 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHUN, TAEHWA · 2012 to 2013
$418k
NHLBI NIH HHS HL106332NHLBI NIH HHS R21 HL106332NIDDK NIH HHS DK084079NIDDK NIH HHS DK095137NIDDK NIH HHS K01 DK084079NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30DK020572NIDDK NIH HHS R01 DK095137
6 · The paper itself

Abstract

Stem cell antigen-1 (Sca1 or Ly6A/E) is a cell surface marker that is widely expressed in mesenchymal stem cells, including adipose-derived stem cells (ASCs). We hypothesized that the fat depot-specific gene signature of Sca1(high) ASCs may play the major role in defining adipose tissue function and extracellular matrix (ECM) remodeling in a depot-specific manner. Herein we aimed to characterize the unique gene signature and ECM remodeling of Sca1(high) ASCs isolated from subcutaneous (inguinal) and visceral (epididymal) adipose tissues. Sca1(high) ASCs are found in the adventitia and perivascular areas of adipose tissues. Sca1(high) ASCs purified with magnetic-activated cell sorting (MACS) demonstrate dendrite or round shape with the higher expression of cytokines and chemokines (e.g., Il6, Cxcl1) and the lower expression of a glucose transporter (Glut1). Subcutaneous and visceral fat-derived Sca1(high) ASCs particularly differ in the gene expressions of adhesion and ECM molecules. While the expression of the major membrane-type collagenase (MMP14) is comparable between the groups, the expressions of secreted collagenases (MMP8 and MMP13) are higher in visceral Sca1(high) ASCs than in subcutaneous ASCs. Consistently, slow but focal MMP-dependent collagenolysis was observed with subcutaneous adipose tissue-derived vascular stromal cells, whereas rapid and bulk collagenolysis was observed with visceral adipose tissue-derived cells in MMP-dependent and -independent manners. These results suggest that the fat depot-specific gene signatures of ASCs may contribute to the distinct patterns of ECM remodeling and adipose function in different fat depots.

Indexed as

AdipogenesisAdipose TissueAnimalsAntigens, LyCell DifferentiationExtracellular MatrixGene Expression Regulation, DevelopmentalHumansIntra-Abdominal FatMembrane ProteinsMesenchymal Stem CellsMiceSubcutaneous FatAntigens, LyLy6a protein, mouseMembrane ProteinsAdipocyteAdipose-derived stem cellCollagenECMMMPObesityRNA-seq

Identifiers

PMID24726953
PMCPMC4127346
OpenAlexW2014653840

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.