Evidence map›Paper›PMID 24726448›Full record

ArticleBiochimica et biophysica acta2014

A mechanistic and structural investigation of modified derivatives of the diaryltriazine class of NNRTIs targeting HIV-1 reverse transcriptase.

Andrea C Mislak, Kathleen M Frey, Mariela Bollini, William L Jorgensen, Karen S Anderson

Open access · bronzeAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Journal of medicinal chemistry · 2023
    Article
  3. Article
  4. Article
  5. Computer-aided discovery of anti-HIV agents.Bioorganic & medicinal chemistry · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Andrea C MislakDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066, USA.
Kathleen M FreyDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066, USA.
Mariela BolliniDepartment of Chemistry, Yale University, New Haven, CT 06520-8107, USA.
William L JorgensenDepartment of Chemistry, Yale University, New Haven, CT 06520-8107, USA.
Karen S AndersonDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520-8066, USA. Electronic address: Karen.Anderson@yale.edu.
Yale University · US

Funding

Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
MECHANISM AND INHIBITION OF HIV REVERSE TRANSCRIPTASER01GM049551 · NIGMS · YALE UNIVERSITY · PI ANDERSON, KAREN S. · 1993 to 2019
$9.0M
POTENTIAL FUNCTIONS FOR WATER PROTEIN INTERACTIONSR01GM032136 · NIGMS · YALE UNIVERSITY · PI JORGENSEN, WILLIAM L. · 1985 to 2023
$8.2M
COMPUTER-AIDED DESIGN OF ANTIHIV DRUGSR01AI044616 · NIAID · YALE UNIVERSITY · PI JORGENSEN, WILLIAM L. · 1999 to 2022
$7.7M
INSTITUTIONAL NATIONAL RESEARCH SERVICE AWARDT32GM007324 · NIGMS · YALE UNIVERSITY · PI BENNETT, ANTON M · 1987 to 2022
$6.2M
Structure activity and structure property relationships for novel anti-HIV agentsF32AI104334 · NIAID · YALE UNIVERSITY · PI FREY, KATHLEEN MARY · 2013 to 2015
$140k
NIAID NIH HHS AI104334NIAID NIH HHS AI44616NIAID NIH HHS F32 AI104334NIAID NIH HHS R01 AI044616NIGMS NIH HHS GM007324NIGMS NIH HHS GM32136NIGMS NIH HHS GM49551NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM032136NIGMS NIH HHS R01 GM049551NIGMS NIH HHS T32 GM007324
6 · The paper itself

Abstract

backgroundNon-nucleoside reverse transcriptase inhibitors (NNRTIs) are vital in treating HIV-1 infection by inhibiting reverse transcriptase (RT). Drug toxicity and resistance drive the need for effective new inhibitors with improved physiochemical properties and potent antiviral activity. Computer-aided and structure-based drug design have guided the addition of solubilizing substituents to the diaryltriazine scaffold. These derivatives have markedly improved solubility and maintain low nanomolar antiviral activity against RT. The molecular and structural basis of inhibition for this series was determined to facilitate future inhibitor development with improved pharmacological profiles.

methodsThe molecular mechanism of inhibition was investigated using transient-state kinetic analysis. Crystal structures of RT in complex with each inhibitor were obtained to investigate the structural basis of inhibition.

resultsThe diaryltriazine and its morpholine derivative have RT inhibition constants of 9±2nM and 14±4nM, respectively. They adopt differential binding modes within the non-nucleoside inhibitor binding pocket to distort the catalytic site geometry and primer grip regions. The novel morpholinopropoxy substituent extends into the RT/solvent interface of the NNIBP.

conclusionsKinetic and structural analyses show that these inhibitors behave as conventional NNRTIs and inhibit the polymerization step. This study confirms that appending solubilizing substituents on the azine ring of diaryltriazine class of NNRTIs that extend into the RT/solvent interface effectively maintains low nanomolar potency and improves physiochemical properties. GENERAL SIGNIFICANCE: The modification of NNRTI scaffolds with solubilizing substituents, which extend into the RT/solvent interface, yields potent antivirals and is an effective strategy for developing novel inhibitors with improved pharmacological properties.

Indexed as

Crystallography, X-RayDrug DesignHIV-1HIV InfectionsHIV Reverse TranscriptaseHumansKineticsMechanical PhenomenaMorpholinesProtein ConformationReverse Transcriptase InhibitorsTriazinesHIV Reverse TranscriptasemorpholineMorpholinesreverse transcriptase, Human immunodeficiency virus 1Reverse Transcriptase InhibitorsTriazinesCrystallographyHIV-1NNRTIReverse transcriptaseTransient kinetics

Identifiers

PMID24726448
PMCPMC4061246
OpenAlexW2090443017

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.