Evidence map›Paper›PMID 24725951›Full record

ArticleVirology2014

The vOTU domain of highly-pathogenic porcine reproductive and respiratory syndrome virus displays a differential substrate preference.

Michelle K Deaton, Allyn Spear, Kay S Faaberg, Scott D Pegan

Abstract read
In one paragraph

Article in Virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. ISG15: It's Complicated.Journal of molecular biology · 2019
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. ISG15 in antiviral immunity and beyond.Nature reviews. Microbiology · 2018
    Review
  14. Article
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Michelle K DeatonDepartment of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA.
Allyn SpearVirus and Prion Research Unit, USDA-ARS-National Animal Disease Center, Ames, IA 50010, USA.
Kay S FaabergVirus and Prion Research Unit, USDA-ARS-National Animal Disease Center, Ames, IA 50010, USA.
Scott D PeganDepartment of Pharmaceutical and Biomedical Sciences, University of Georgia, Athens, GA 30602, USA. Electronic address: spegan@uga.edu.
National Animal Disease Center · USUniversity of Denver · USUniversity of Georgia · US

Funding

Origin of the innate immunity suppression caused by nairovirus' protease activityR01AI109008 · NIAID · UNIVERSITY OF GEORGIA · PI PEGAN, SCOTT DUSAN · 2014 to 2018
$1.6M
Assessment of deubiquitinating and deISGylating activity; specificity motifs amonR03AI092249 · NIAID · UNIVERSITY OF DENVER (COLORADO SEMINARY) · PI PEGAN, SCOTT DUSAN · 2011 to 2012
$144k
NIAID NIH HHS 1R03AI092249-01NIAID NIH HHS R01 AI109008NIAID NIH HHS R03 AI092249PHS HHS 1R01AL109008-01
6 · The paper itself

Abstract

Arterivirus genus member Porcine reproductive and respiratory syndrome virus (PRRSV) causes an economically devastating disease, recently exacerbated by the emergence of highly pathogenic strains (HP-PRRSV). Within the nonstructural protein 2 of PRRSV is a deubiquitinating enzyme domain belonging to the viral ovarian tumor (vOTU) protease superfamily. vOTUs, which can greatly vary in their preference for their host ubiquitin (Ub) and Ub-like substrates such as interferon stimulated gene 15 (ISG15), have been implicated as a potential virulence factor. Since various strains of PRRSV have large variations in virulence, the specificity of vOTUs from two PRRSV strains of varying virulence were determined. While both vOTUs showed de-ubiquitinating activity and markedly low deISGylating activity, HP-PRRSV demonstrated a strong preference for lysine 63-linked poly-Ubiquitin, tied to innate immune response regulation. This represents the first report of biochemical activity unique to HP-PRRSV that has implications for a potential increase in immunosuppression and virulence.

Indexed as

AnimalsPorcine respiratory and reproductive syndrome virusSubstrate SpecificitySwineUbiquitin-Specific ProteasesViral Nonstructural ProteinsVirulence FactorsUbiquitin-Specific ProteasesViral Nonstructural ProteinsVirulence FactorsISG15nsp2PLP2PRRSVUbiquitinvOTU

Identifiers

PMID24725951
PMCPMC3992837
OpenAlexW2034530389

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.