Evidence map›Paper›PMID 24723404›Full record

ArticleJournal of experimental botany2014

Gamma-secretase subunits associate in intracellular membrane compartments in Arabidopsis thaliana.

Michalina Smolarkiewicz, Tomasz Skrzypczak, Michał Michalak, Krzysztof Leśniewicz, J Ross Walker, Gwyneth Ingram, Przemysław Wojtaszek

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Modulation of receptor-like transmembrane kinase 1 nuclear localization by DA1 peptidases in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Article
  7. Article
  8. The Full-Size ABCG Transporter ofFrontiers in plant science · 2020
    Article
  9. Article
  10. Non-Catalytic Roles of Presenilin Throughout Evolution.Journal of Alzheimer's disease : JAD · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Michalina SmolarkiewiczDepartment of Molecular and Cellular Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland michasia@amu.edu.pl przemow@amu.edu.pl.
Tomasz SkrzypczakDepartment of Molecular and Cellular Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland.
Michał MichalakDepartment of Molecular and Cellular Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland.
Krzysztof LeśniewiczDepartment of Molecular and Cellular Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland.
J Ross WalkerInstitute of Molecular Plant Sciences, University of Edinburgh, King's Buildings, Mayfield Rd, Edinburgh EH9 3JH, UK.
Gwyneth IngramInstitute of Molecular Plant Sciences, University of Edinburgh, King's Buildings, Mayfield Rd, Edinburgh EH9 3JH, UK UMR 5667 CNRS-INRA-ENSL-UCB Lyon I, Reproduction et Développement des Plantes, ENS Lyon, 46, Allée d'Italie, 69364 LYON Cedex 07, France.
Przemysław WojtaszekDepartment of Molecular and Cellular Biology, Adam Mickiewicz University, Umultowska 89, 61-614 Poznań, Poland michasia@amu.edu.pl przemow@amu.edu.pl.
Adam Mickiewicz University in Poznań · PLLaboratoire Reproduction et Développement des Plantes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gamma-secretase is a multisubunit complex with intramembrane proteolytic activity. In humans it was identified in genetic screens of patients suffering from familial forms of Alzheimer's disease, and since then it was shown to mediate cleavage of more than 80 substrates, including amyloid precursor protein or Notch receptor. Moreover, in animals, γ-secretase was shown to be involved in regulation of a wide range of cellular events, including cell signalling, regulation of endocytosis of membrane proteins, their trafficking, and degradation. Here we show that genes coding for γ-secretase homologues are present in plant genomes. Also, amino acid motifs crucial for γ-secretase activity are conserved in plants. Moreover, all γ-secretase subunits: PS1/PS2, APH-1, PEN-2, and NCT colocalize and interact with each other in Arabidopsis thaliana protoplasts. The intracellular localization of γ-secretase subunits in Arabidopsis protoplasts revealed a distribution in endomembrane system compartments that is consistent with data from animal studies. Together, our data may be considered as a starting point for analysis of γ-secretase in plants.

Indexed as

Amino Acid SequenceAmyloid Precursor Protein SecretasesArabidopsisArabidopsis ProteinsIntracellular MembranesMolecular Sequence DataPhylogenyProtoplastsSequence AlignmentAmyloid Precursor Protein SecretasesArabidopsis ProteinsAuthophagycomplex assemblyendomembrane systemgamma-secretaseintramembrane proteaselocalizationpresenilinsenescencevesicular trafficking.

Identifiers

PMID24723404
PMCPMC4071823
OpenAlexW2162345959

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.