Evidence map›Paper›PMID 24723377›Full record

ArticleEuropean journal of immunology2014

A novel T-cell receptor mimic defines dendritic cells that present an immunodominant West Nile virus epitope in mice.

Sojung Kim, Amelia K Pinto, Nancy B Myers, Oriana Hawkins, Krysten Doll, Saghar Kaabinejadian, Jason Netland, Michael J Bevan, Jon A Weidanz, William H Hildebrand and 2 more

Open access · greenAbstract read
In one paragraph

Article in European journal of immunology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Dynamics of Tissue-Specific CD8Journal of virology · 2018
    Article
  6. Article
  7. Review
  8. Article
  9. Functional evidence for TCR-intrinsic specificity for MHCII.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Sojung KimDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Amelia K Pinto
Nancy B Myers
Oriana Hawkins
Krysten Doll
Saghar Kaabinejadian
Jason Netland
Michael J Bevan
Jon A Weidanz
William H Hildebrand
Michael S Diamond
Ted H Hansen
Washington University in St. Louis · USTexas Tech University Health Sciences Center · USUniversity of Oklahoma Health Sciences Center · USHoward Hughes Medical Institute · USUniversity of Washington · US

Funding

Discovery and Targeting of West Nile Virus EpitopesU01AI082057 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HILDEBRAND, WILLIAM · 2009 to 2013
$5.3M
MHC-I regulation by herpes virusR01AI019687 · NIAID · WASHINGTON UNIVERSITY · PI FREMONT, DAVED H. · 1985 to 2016
$5.2M
NIAID NIH HHS AI19876NIAID NIH HHS R01 AI019687NIAID NIH HHS U01 AI082057NIAID NIH HHS U01AI082057
6 · The paper itself

Abstract

We used a newly generated T-cell receptor mimic monoclonal antibody (TCRm MAb) that recognizes a known nonself immunodominant peptide epitope from West Nile virus (WNV) NS4B protein to investigate epitope presentation after virus infection in C57BL/6 mice. Previous studies suggested that peptides of different length, either SSVWNATTAI (10-mer) or SSVWNATTA (9-mer) in complex with class I MHC antigen H-2D(b) , were immunodominant after WNV infection. Our data establish that both peptides are presented on the cell surface after WNV infection and that CD8(+) T cells can detect 10- and 9-mer length variants similarly. This result varies from the idea that a given T-cell receptor (TCR) prefers a single peptide length bound to its cognate class I MHC. In separate WNV infection studies with the TCRm MAb, we show that in vivo the 10-mer was presented on the surface of uninfected and infected CD8α(+) CD11c(+) dendritic cells, which suggests the use of direct and cross-presentation pathways. In contrast, CD11b(+) CD11c(-) cells bound the TCRm MAb only when they were infected. Our study demonstrates that TCR recognition of peptides is not limited to certain peptide lengths and that TCRm MAbs can be used to dissect the cell-type specific mechanisms of antigen presentation in vivo.

Indexed as

Immunodominant EpitopesAnimalsCD11b AntigenCD11c AntigenCD8-Positive T-LymphocytesDendritic CellsMiceMice, Inbred C57BLReceptors, Antigen, T-CellViral Nonstructural ProteinsWest Nile virusCD11b AntigenCD11c AntigenImmunodominant EpitopesNS4B protein, flavivirusReceptors, Antigen, T-CellViral Nonstructural ProteinsAntigen presentationCytotoxic T lymphocytesFlavivirusT-cell receptor mimic

Identifiers

PMID24723377
PMCPMC4107030
OpenAlexW1530204197

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.