Evidence map›Paper›PMID 24722632›Full record

ArticleThe ISME journal2014

Gammaproteobacterial diazotrophs and nifH gene expression in surface waters of the South Pacific Ocean.

Pia H Moisander, Tracy Serros, Ryan W Paerl, Roxanne A Beinart, Jonathan P Zehr

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 130 citations in OpenAlex.

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  6. ISME communications · 2025
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  9. Review
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  13. Frontiers in microbiology · 2022
    Article
  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Pia H MoisanderDepartment of Ocean Sciences, University of California Santa Cruz, Santa Cruz, CA, USA.
Tracy SerrosDepartment of Ocean Sciences, University of California Santa Cruz, Santa Cruz, CA, USA.
Ryan W PaerlDepartment of Ocean Sciences, University of California Santa Cruz, Santa Cruz, CA, USA.
Roxanne A BeinartDepartment of Ocean Sciences, University of California Santa Cruz, Santa Cruz, CA, USA.
Jonathan P ZehrDepartment of Ocean Sciences, University of California Santa Cruz, Santa Cruz, CA, USA.
University of California, Santa Cruz · USUniversity of California, San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In addition to the cyanobacterial N2-fixers (diazotrophs), there is a high nifH gene diversity of non-cyanobacterial groups present in marine environments, yet quantitative information about these groups is scarce. N2 fixation potential (nifH gene expression), diversity and distributions of the uncultivated diazotroph phylotype γ-24774A11, a putative gammaproteobacterium, were investigated in the western South Pacific Ocean. γ-24774A11 gene copies correlated positively with diazotrophic cyanobacteria, temperature, dissolved organic carbon and ambient O2 saturation, and negatively with depth, chlorophyll a and nutrients, suggesting that carbon supply, access to light or inhibitory effects of DIN may control γ-24774A11 abundances. Maximum nifH gene-copy abundance was 2 × 10(4) l(-1), two orders of magnitude less than that for diazotrophic cyanobacteria, while the median γ-24774A11 abundance, 8 × 10(2) l(-1), was greater than that for the UCYN-A cyanobacteria, suggesting a more homogeneous distribution in surface waters. The abundance of nifH transcripts by γ-24774A11 was greater during the night than during the day, and the transcripts generally ranged from 0-7%, but were up to 26% of all nifH transcripts at each station. The ubiquitous presence and low variability of γ-24774A11 abundances across tropical and subtropical oceans, combined with the consistent nifH expression reported in this study, suggest that γ-24774A11 could be one of the most important heterotrophic (or photoheterotrophic) diazotrophs and may need to be considered in future N budget estimates and models.

Indexed as

CyanobacteriaGammaproteobacteriaGene DosageGene ExpressionNitrogen FixationOxidoreductasesPacific OceanPhylogenySeawaterTemperatureWater Microbiologynitrogenase reductaseOxidoreductases

Identifiers

PMID24722632
PMCPMC4184014
OpenAlexW2067685672

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.