Evidence map›Paper›PMID 24722152›Full record

ArticleJournal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer2014

Molecular mechanisms underlying oncogenic RET fusion in lung adenocarcinoma.

Tatsuji Mizukami, Kouya Shiraishi, Yoko Shimada, Hideaki Ogiwara, Koji Tsuta, Hitoshi Ichikawa, Hiromi Sakamoto, Mamoru Kato, Tatsuhiro Shibata, Takashi Nakano and 1 more

Abstract read
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In one paragraph

Article in Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Genes · 2025
    Review
  3. AccurateInternational journal of molecular sciences · 2025
    Article
  4. CCDC6-RET fusion protein regulates Ras/MAPK signaling through the fusion- GRB2-SHC1 signal niche.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. JTO clinical and research reports · 2024
    Article
  6. Article
  7. Precision oncology with selective RET inhibitor selpercatinib inTherapeutic advances in medical oncology · 2023
    Review
  8. Review
  9. Review
  10. Clinicopathologic characteristics and diagnostic methods ofTranslational lung cancer research · 2022
    Article
  11. Review
  12. Review
  13. Novel Emerging Molecular Targets in Non-Small Cell Lung Cancer.International journal of molecular sciences · 2021
    Review
  14. Review
  15. Article
  16. Review
  17. State-of-the-Art Strategies for TargetingJournal of clinical oncology : official journal of the American Society of Clinical Oncology · 2020
    Review
  18. Review
  19. Current management ofTherapeutic advances in medical oncology · 2020
    Review
  20. RET kinase alterations in targeted cancer therapy.Cancer drug resistance (Alhambra, Calif.) · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Tatsuji Mizukami*Division of Genome Biology, National Cancer Center Research Institute, Tokyo, Japan; †Department of Radiation Oncology, Gunma University Graduate School of Medicine, Gunma, Japan; ‡Division of Pathology and Clinical Laboratories, National Cancer Center Hospital, Tokyo, Japan; §Division of Genetics, National Cancer Center Research Institute, Tokyo, Japan; and ¶Division of Cancer Genomics, National Cancer Center Research Institute, Tokyo, Japan.
Kouya Shiraishi
Yoko Shimada
Hideaki Ogiwara
Koji Tsuta
Hitoshi Ichikawa
Hiromi Sakamoto
Mamoru Kato
Tatsuhiro Shibata
Takashi Nakano
Takashi Kohno
Gunma University · JPNational Cancer Centre Japan · JPTokyo National Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOncogenic RET fusion, caused by an inversion in chromosome 10, was recently identified as a driver mutation for the development of lung adenocarcinoma (LADC). Nevertheless, the molecular mechanism(s) underlying the rearrangement of the RET locus during lung carcinogenesis are unknown.

methodsGenomic segments containing breakpoint junctions for RET fusions were cloned and analyzed by genomic polymerase chain reaction and genome capture sequencing using a next-generation sequencer to identify the mechanisms involved in DNA strand breaks and illegitimate joining of DNA ends. Of the 18 cases studied, 16 were identified by screening 671 LADC cases and two were previously published.

resultsAlmost all (17 of 18, 94%) of the breakpoints in RET were located within a 2.0-kb region spanning exon 11 to intron 11 and no breakpoint occurred within 4 bp of any other. This suggested that as in papillary thyroid carcinoma, DNA strand breaks formed at nonspecific sites within this region trigger RET fusion. Just over half of the RET fusions in LADC (10 of 18, 56%) were caused by simple reciprocal inversion, and two DNA-repair mechanisms, namely nonhomologous end joining and break-induced replication, were deduced to have contributed to the illegitimate joining of the DNA ends.

conclusionsOncogenic RET fusion in LADC occurs through multiple pathways and involves the illegitimate repair of DNA strand breaks through mechanisms different from those identified in papillary thyroid carcinoma, where RET fusion also functions as a driver mutation.

Indexed as

Chromosome BreakpointsChromosome InversionAdenocarcinomaCarcinogenesisCytoskeletal ProteinsDNA End-Joining RepairDNA, NeoplasmExonsGenetic VariationHumansIntronsKinesinsLung NeoplasmsMolecular Sequence DataOncogene Proteins, FusionProto-Oncogene Proteins c-retCCDC6 protein, humanCytoskeletal ProteinsDNA, NeoplasmKIF5B protein, humanKinesinsOncogene Proteins, FusionProto-Oncogene Proteins c-retRET protein, human

Identifiers

PMID24722152
OpenAlexW1984080345

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.