Evidence map›Paper›PMID 24719448›Full record

ArticleJournal of clinical microbiology2014

Phylogeny of the clinically relevant species of the emerging fungus Trichoderma and their antifungal susceptibilities.

Marcelo Sandoval-Denis, Deanna A Sutton, José F Cano-Lira, Josepa Gené, Annette W Fothergill, Nathan P Wiederhold, Josep Guarro

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Observational
  4. Article
  5. Discovery of Trichoderma frianum sp. nov. from India: a new member of the Trichoderma harzianum species complex (Harzianum clade).International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  6. Article
  7. Eleven new species ofMycology · 2025
    Article
  8. Frontiers in microbiology · 2025
    Article
  9. Diversity ofFrontiers in microbiology · 2024
    Article
  10. Non-Journal of fungi (Basel, Switzerland) · 2023
    Review
  11. Journal of fungi (Basel, Switzerland) · 2023
    Review
  12. Two newMycoKeys · 2023
    Article
  13. Echinocandins - structure, mechanism of action and use in antifungal therapy.Journal of enzyme inhibition and medicinal chemistry · 2022
    Review
  14. Pathogens (Basel, Switzerland) · 2022
    Article
  15. Article
  16. Frontiers in fungal biology · 2022
    Review
  17. Article
  18. Journal of fungi (Basel, Switzerland) · 2021
    Article
  19. New Species ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marcelo Sandoval-DenisUnitat de Microbiologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, Spain.
Deanna A SuttonFungus Testing Laboratory, University of Texas Health Science Center, San Antonio, Texas, USA.
José F Cano-LiraUnitat de Microbiologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, Spain.
Josepa GenéUnitat de Microbiologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, Spain josepa.gene@urv.cat.
Annette W FothergillFungus Testing Laboratory, University of Texas Health Science Center, San Antonio, Texas, USA.
Nathan P WiederholdFungus Testing Laboratory, University of Texas Health Science Center, San Antonio, Texas, USA.
Josep GuarroUnitat de Microbiologia, Facultat de Medicina i Ciències de la Salut, IISPV, Universitat Rovira i Virgili, Reus, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A set of 73 isolates of the emerging fungus Trichoderma isolated from human and animal clinical specimens were characterized morphologically and molecularly using a multilocus sequence analysis that included the internal transcribed spacer (ITS) regions of the nuclear ribosomal DNA and fragments of the translation elongation factor 1 alpha (Tef1), endochitinase CHI18-5 (Chi18-5), and actin 1 (Act1) genes. The most frequent species was Trichoderma longibrachiatum (26%), followed by Trichoderma citrinoviride (18%), the Hypocrea lixii/Trichoderma harzianum species complex (15%), the newly described species Trichoderma bissettii (12%), and Trichoderma orientale (11%). The most common anatomical sites of isolation in human clinical specimens were the respiratory tract (40%), followed by deep tissue (30%) and superficial tissues (26%), while all the animal-associated isolates were obtained from superficial tissue samples. Susceptibilities of the isolates to eight antifungal drugs in vitro showed mostly high MICs, except for voriconazole and the echinocandins.

Indexed as

PhylogenyActinsAnimalsAntifungal AgentsChitinasesCluster AnalysisCommunicable Diseases, EmergingDNA, FungalDNA, Ribosomal SpacerHumansMicrobial Sensitivity TestsMolecular Sequence DataMultilocus Sequence TypingMycosesPeptide Elongation Factor 1TrichodermaActinsAntifungal AgentsChitinasesDNA, FungalDNA, Ribosomal SpacerPeptide Elongation Factor 1

Identifiers

PMID24719448
PMCPMC4042759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.