Evidence map›Paper›PMID 24718609›Full record

ArticlePloS one2014

Interaction of 6 mercaptopurine with calf thymus DNA--deciphering the binding mode and photoinduced DNA damage.

Sayeed Ur Rehman, Zahid Yaseen, Mohammed Amir Husain, Tarique Sarwar, Hassan Mubarak Ishqi, Mohammad Tabish

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 162 citations in OpenAlex.

  1. Pooled it
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  10. Influence of the Photodegradation of Azathioprine on DNA and Cells.International journal of molecular sciences · 2022
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  15. Hydrothermal synthesis and characterization of magnetic FeJournal of materials science. Materials in medicine · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sayeed Ur RehmanDepartment of Biochemistry, Faculty of Life Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Zahid YaseenDepartment of Chemistry, Faculty of Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Mohammed Amir HusainDepartment of Biochemistry, Faculty of Life Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Tarique SarwarDepartment of Biochemistry, Faculty of Life Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Hassan Mubarak IshqiDepartment of Biochemistry, Faculty of Life Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Mohammad TabishDepartment of Biochemistry, Faculty of Life Sciences, A.M. University, Aligarh, Uttar Pradesh, India.
Aligarh Muslim University · INTexas A&M University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA is one of the major intracellular targets for a wide range of anticancer and antibiotic drugs. Elucidating the binding between small molecules and DNA provides great help in understanding drug-DNA interactions and in designing of new and promising drugs for clinical use. The ability of small molecules to bind and interfere with DNA replication and transcription provides further insight into how the drugs control the expression of genes. Interaction of an antimetabolite anticancer drug 6 mercaptopurine (6MP) with calf thymus DNA was studied using various approaches like UV-visible spectroscopy, fluorescence spectroscopy, CD, viscosity and molecular docking. UV-visible spectroscopy confirmed 6MP-DNA interaction. Steady state fluorescence experiments revealed a moderate binding constant of 7.48 × 10(3) M(-1) which was consistent with an external binding mode. Competitive displacement assays further confirmed a non-intercalative binding mode of 6MP which was further confirmed by CD and viscosity experiments. Molecular docking further revealed the minimum energy conformation (-119.67 kJ/mole) of the complex formed between DNA and 6MP. Hence, the biophysical techniques and in-silico molecular docking approaches confirmed the groove binding/electrostatic mode of interaction between 6MP and DNA. Further, photo induced generation of ROS by 6MP was studied spectrophotometrically and DNA damage was assessed by plasmid nicking and comet assay. There was a significant increase in ROS generation and consequent DNA damage in the presence of light.

Indexed as

DNA DamageAnimalsAntimetabolites, AntineoplasticCattleCircular DichroismComet AssayDNADNA, CircularIodidesLightModels, MolecularMolecular Docking SimulationNucleic Acid ConformationOsmolar ConcentrationPlasmidsReactive Oxygen SpeciesAntimetabolites, AntineoplasticDNADNA, CircularIodidesReactive Oxygen SpeciesSuperoxidesThioinosine

Identifiers

PMID24718609
PMCPMC3981731
OpenAlexW2085507557

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.