Evidence map›Paper›PMID 24717448›Full record

ArticlePloS one2014

Proteomic analysis of saliva in HIV-positive heroin addicts reveals proteins correlated with cognition.

Stephen S Dominy, Joseph N Brown, Mark I Ryder, Marina Gritsenko, Jon M Jacobs, Richard D Smith

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Assessment of the Utility of the Oral Fluid and Plasma Proteomes for Hydrocodone Exposure.Journal of medical toxicology : official journal of the American College of Medical Toxicology · 2020
    Article
  12. Review
  13. Salivary biomarkers and proteomics: future diagnostic and clinical utilities.Acta otorhinolaryngologica Italica : organo ufficiale della Societa italiana di otorinolaringologia e chirurgia cervico-facciale · 2017
    Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Stephen S DominyDepartment of Psychiatry, University of California San Francisco, San Francisco, California, United States of America.
Joseph N BrownBiological Sciences Division, Pacific Northwest National Laboratories, Richland, Washington, United States of America.
Mark I RyderDivision of Periodontology, Department of Orofacial Sciences, University of California San Francisco, San Francisco, California, United States of America.
Marina GritsenkoBiological Sciences Division, Pacific Northwest National Laboratories, Richland, Washington, United States of America.
Jon M JacobsBiological Sciences Division, Pacific Northwest National Laboratories, Richland, Washington, United States of America.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratories, Richland, Washington, United States of America.
Pacific Northwest National Laboratory · USUniversity of California, San Francisco · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
The Cerebrospinal Fluid Proteome in HIV-1 Infection and Opiate AddictionP01DA026134 · NIDA · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2008 to 2010
$3.0M
NIAID NIH HHS P30 AI027763NIAID NIH HHS P30-AI027763NIDA NIH HHS P01 DA026134NIGMS NIH HHS P41 GM103493NIGMS NIH HHS P41GM103493
6 · The paper itself

Abstract

The prevalence of HIV-associated neurocognitive disorders (HAND) remains high despite effective antiretroviral therapies. Multiple etiologies have been proposed over the last several years to account for this phenomenon, including the neurotoxic effects of antiretrovirals and co-morbid substance abuse; however, no underlying molecular mechanism has been identified. Emerging evidence in several fields has linked the gut to brain diseases, but the effect of the gut on the brain during HIV infection has not been explored. Saliva is the most accessible gut biofluid, and is therefore of great scientific interest for diagnostic and prognostic purposes. This study presents a longitudinal, liquid chromatography-mass spectrometry-based quantitative proteomics study investigating saliva samples taken from 8 HIV-positive (HIV+), 11 -negative (HIV-) heroin addicts. In addition, saliva samples were investigated from 11 HIV-, non-heroin addicted healthy controls. In the HIV+ group, 58 proteins were identified that show significant correlations with cognitive scores, implicating disruption of protein quality control pathways by HIV. Notably, only one protein from the HIV- heroin addict cohort showed a significant correlation with cognitive scores, and no proteins correlated with cognitive scores in the healthy control group. In addition, the majority of correlated proteins have been shown to be associated with exosomes, allowing us to propose that the salivary glands and/or oral epithelium may modulate brain function during HIV infection through the release of discrete packets of proteins in the form of exosomes.

Indexed as

CognitionHeroinAdultDemographyEnzyme-Linked Immunosorbent AssayFemaleHeat-Shock ProteinsHIV SeropositivityHumansInterleukin 1 Receptor Antagonist ProteinMaleMethadoneModels, BiologicalProteomeProteomicsSalivaHeat-Shock ProteinsHeroinIL1RN protein, humanInterleukin 1 Receptor Antagonist ProteinMethadoneProteomeSalivary Proteins and Peptides

Identifiers

PMID24717448
PMCPMC3981673
OpenAlexW2064332115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.