Evidence map›Paper›PMID 24715955›Full record

ArticleF1000Research2013

Polarized localization and borate-dependent degradation of the Arabidopsis borate transporter BOR1 in tobacco BY-2 cells.

Noboru Yamauchi, Tadashi Gosho, Satoru Asatuma, Kiminori Toyooka, Toru Fujiwara, Ken Matsuoka

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In one paragraph

Article in F1000Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Noboru YamauchiGraduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, 812-8581, Japan.
Tadashi GoshoBiotechnology Research Center, The University of Tokyo, Tokyo, 113-8657, Japan.
Satoru AsatumaLaboratory of Plant Nutrition, Faculty of Agriculutre, Kyushu University, Fukuoka, 812-8581, Japan ; Current address: Omu Milk Products Co., Ltd., Omuta, 836-0895, Japan.
Kiminori ToyookaRIKEN Plant Science Center, Yokohama, 230-0045, Japan ; Current address: RIKEN Center for Sustainable Resource Science, Yokohama, 230-0045, Japan.
Toru FujiwaraBiotechnology Research Center, The University of Tokyo, Tokyo, 113-8657, Japan ; Current address: Laboratory of Plant Nutrition and Fertilizer, Graduate School of Agricultural and Life Science, The University of Tokyo, Tokyo, 113-8657, Japan.
Ken MatsuokaGraduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, 812-8581, Japan ; Laboratory of Plant Nutrition, Faculty of Agriculutre, Kyushu University, Fukuoka, 812-8581, Japan ; RIKEN Plant Science Center, Yokohama, 230-0045, Japan ; Organelle Homeostasis Research Center, Kyushu University, Fukuoka, 812-8581, Japan ; Biotron Application Center, Kyushu University, Fukuoka, 812-8581, Japan.
Kyushu University · JPBiotechnology Research Center · IRRIKEN Center for Sustainable Resource Science · JPTokyo University of Agriculture · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Arabidopsis the borate transporter BOR1, which is located in the plasma membrane, is degraded in the presence of excess boron by an endocytosis-mediated mechanism. A similar mechanism was suggested in rice as excess boron decreased rice borate transporter levels, although in this case whether the decrease was dependent on an increase in degradation or a decrease in protein synthesis was not elucidated. To address whether the borate-dependent degradation mechanism is conserved among plant cells, we analyzed the fate of GFP-tagged BOR1 (BOR1-GFP) in transformed tobacco BY-2 cells. Cells expressing BOR1-GFP displayed GFP fluorescence at the plasma membrane, especially at the membrane between two attached cells. The plasma membrane signal was abolished when cells were incubated in medium with a high concentration of borate (3 to 5 mM). This decrease in BOR1-GFP signal was mediated by a specific degradation of the protein after internalization by endocytosis from the plasma membrane. Pharmacological analysis indicated that the decrease in BOR1-GFP largely depends on the increase in degradation rate and that the degradation was mediated by a tyrosine-motif and the actin cytoskeleton. Tyr mutants of BOR1-GFP, which has been shown to inhibit borate-dependent degradation in Arabidopsis root cells, did not show borate-dependent endocytosis in tobacco BY-2 cells. These findings indicate that the borate-dependent degradation machinery of the borate transporter is conserved among plant species.

Identifiers

PMID24715955
PMCPMC3954168
OpenAlexW2079364229

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.