Evidence map›Paper›PMID 24715004›Full record

ArticlePlant reproduction2014

Flower development in Coffea arabica L.: new insights into MADS-box genes.

Raphael Ricon de Oliveira, Igor Cesarino, Paulo Mazzafera, Marcelo Carnier Dornelas

Abstract read
PubMed Publisher
In one paragraph

Article in Plant reproduction, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. Flowering and Fruiting ofPlants (Basel, Switzerland) · 2025
    Review
  4. Article
  5. Transcriptomic Analyses Reveal ThatInternational journal of molecular sciences · 2024
    Article
  6. Multigenic regulation in the ethylene biosynthesis pathway during coffee flowering.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  7. Genome-Wide Analyses of MADS-Box Genes inPlants (Basel, Switzerland) · 2022
    Article
  8. Article
  9. Isolation and Functional Analysis of aPlants (Basel, Switzerland) · 2021
    Article
  10. Pitfall Flower Development and Organ Identity ofPlants (Basel, Switzerland) · 2020
    Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Raphael Ricon de OliveiraCentro de Biologia Molecular e Engenharia Genética, Universidade Estadual de Campinas, Cidade Universitária "Zeferino Vaz", Campinas, São Paulo, Brazil, rapharicon@gmail.com.
Igor Cesarino
Paulo Mazzafera
Marcelo Carnier Dornelas
Universidade Estadual de Campinas (UNICAMP) · BRVIB-UGent Center for Plant Systems Biology · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coffea arabica L. shows peculiar characteristics during reproductive development, such as flowering asynchrony, periods of floral bud dormancy, mucilage secretion and epipetalous stamens. The MADS-box transcription factors are known to control several developmental processes in plants, including flower and fruit development. Significant differences are found among plant species regarding reproductive development and little is known about the role of MADS-box genes in Coffea reproductive development. Thus, we used anatomical and comparative molecular analyses to explore the flowering process in coffee. The main morphological changes during flower development in coffee were observed by optical and scanning electron microscopy. Flowering asynchrony seems to be related to two independent processes: the asynchronous development of distinct buds before the reproductive induction and the asynchronous development of floral meristems within each bud after the reproductive induction. A total of 23 C. arabica MADS-box genes were characterized by sequence comparison with putative Arabidopsis orthologs and their expression profiles were analyzed by RT-PCR in different tissues. The expression of the ABC model orthologs in Coffea during floral development was determined by in situ hybridization. The APETALA1 (AP1) ortholog is expressed only late in the perianth, which is also observed for the APETALA3 and TM6 orthologs. Conversely, the PISTILLATA ortholog is widely expressed in early stages, but restrict to stamens and carpels in later stages of flower development, while the expression of the AGAMOUS ortholog is always restricted to fertile organs. The AP1 and PISTILLATA orthologs are also expressed at specific floral organs, such as bracts and colleters, respectively, suggesting a potential role in the development of such structures. Altogether, the results from our comprehensive expression analyses showed significant differences between the spatiotemporal expression profiles of C. arabica MADS-box genes and their orthologs, which suggests differential functionalization in coffee. Moreover, these differences might also partially explain the particular characteristics of floral development in coffee, such as mucilage secretion and formation of epipetalous stamens.

Indexed as

CoffeaFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantMADS Domain ProteinsMolecular Sequence DataMultigene FamilyPhylogenyPlant ProteinsMADS Domain ProteinsPlant Proteins

Identifiers

PMID24715004
OpenAlexW2004179714

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.