Evidence map›Paper›PMID 24714615›Full record

ArticlePloS one2014

A positive feedback mechanism that regulates expression of miR-9 during neurogenesis.

Jonathan L Davila, Loyal A Goff, Christopher L Ricupero, Cynthia Camarillo, Eileen N Oni, Mavis R Swerdel, Alana J Toro-Ramos, Jiali Li, Ronald P Hart

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jonathan L DavilaW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Loyal A GoffW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Christopher L RicuperoW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Cynthia CamarilloW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Eileen N OniW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Mavis R SwerdelW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Alana J Toro-RamosW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Jiali LiW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Ronald P HartW.M. Keck Center for Collaborative Neuroscience and the Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey, United States of America.
Rutgers, The State University of New Jersey · US

Funding

UMDNJ-RUTGERS UNIVERSITY PIPELINE PROGRAMR25GM055145 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI HAIMOVICH, BEATRICE, LANGER, JEROME ALAN · 1996 to 2020
$8.7M
Health disparities and agingin societies in transitionR01AG023522 · NIA · UNIVERSITY COLLEGE LONDON · PI MARMOT, MICHAEL G · 2004 to 2008
$2.2M
Epigenetic regulation of microRNAs in neurogenesisR21MH085088 · NIMH · RUTGERS, THE STATE UNIV OF N.J. · PI HART, RONALD P · 2009 to 2010
$422k
NIA NIH HHS 1R01 AG23522NIGMS NIH HHS R25 GM055145NIMH NIH HHS R21 MH085088Wellcome Trust 064947/Z/01/ZWellcome Trust 081081/Z/06/Z
6 · The paper itself

Abstract

MiR-9, a neuron-specific miRNA, is an important regulator of neurogenesis. In this study we identify how miR-9 is regulated during early differentiation from a neural stem-like cell. We utilized two immortalized rat precursor clones, one committed to neurogenesis (L2.2) and another capable of producing both neurons and non-neuronal cells (L2.3), to reproducibly study early neurogenesis. Exogenous miR-9 is capable of increasing neurogenesis from L2.3 cells. Only one of three genomic loci capable of encoding miR-9 was regulated during neurogenesis and the promoter region of this locus contains sufficient functional elements to drive expression of a luciferase reporter in a developmentally regulated pattern. Furthermore, among a large number of potential regulatory sites encoded in this sequence, Mef2 stood out because of its known pro-neuronal role. Of four Mef2 paralogs, we found only Mef2C mRNA was regulated during neurogenesis. Removal of predicted Mef2 binding sites or knockdown of Mef2C expression reduced miR-9-2 promoter activity. Finally, the mRNA encoding the Mef2C binding partner HDAC4 was shown to be targeted by miR-9. Since HDAC4 protein could be co-immunoprecipitated with Mef2C protein or with genomic Mef2 binding sequences, we conclude that miR-9 regulation is mediated, at least in part, by Mef2C binding but that expressed miR-9 has the capacity to reduce inhibitory HDAC4, stabilizing its own expression in a positive feedback mechanism.

Indexed as

Feedback, PhysiologicalGene Expression Regulation, Developmental3' Untranslated RegionsAnimalsBase SequenceBinding SitesCell DifferentiationCell Line, TransformedHistone DeacetylasesMEF2 Transcription FactorsMicroRNAsNeural Stem CellsNeurogenesisNeuronsPromoter Regions, GeneticProtein Binding3' Untranslated RegionsHDAC4 protein, ratHistone DeacetylasesMEF2 Transcription FactorsMicroRNAsMIRN9 microRNA, ratRNA, Messenger

Identifiers

PMID24714615
PMCPMC3979806
OpenAlexW2042324901

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.