Evidence map›Paper›PMID 24713849›Full record

ArticleRNA (New York, N.Y.)2014

Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex.

Emily D Egan, Craig R Braun, Steven P Gygi, Danesh Moazed

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 106 citations in OpenAlex.

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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Emily D EganHoward Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Craig R BraunDepartment of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Danesh MoazedHoward Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts 02115, USA Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Harvard University · USHoward Hughes Medical Institute · US

Funding

RNAi-mediated Targeting of Hetorochromatin AssemblyR01GM072805 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MOAZED, DANESH · 2005 to 2025
$6.9M
Howard Hughes Medical InstituteNIGMS NIH HHS GM072805NIGMS NIH HHS R01 GM072805
6 · The paper itself

Abstract

RNA is a central component of gene-silencing pathways that regulate diverse cellular processes. In the fission yeast Schizosaccharomyces pombe, an RNA-based mechanism represses meiotic gene expression during vegetative growth. This pathway depends on the zinc finger protein Red1, which is required to degrade meiotic mRNAs as well as to target histone H3 lysine 9 (H3K9) methylation, a repressive chromatin mark, to a subset of meiotic genes. However, the mechanism of Red1 function is unknown. Here we use affinity purification and mass spectrometry to identify a Red1-containing nuclear RNA silencing (NURS) complex. In addition to Red1, this complex includes the Mtl1, Red5, Ars2, Rmn1, and Iss10 proteins and associates with several other complexes that are involved in either signaling or mediating RNA silencing. By analyzing the effects of gene knockouts and inducible knockdown alleles, we show that NURS subunits regulate RNA degradation and H3K9 methylation at meiotic genes. We also identify roles for individual NURS subunits in interactions with Mmi1, an RNA-binding protein that marks meiotic RNAs for destruction, and the nuclear exosome RNA degradation complex. Finally, we show that the levels of H3K9 methylation at meiotic genes are not sufficient to restrict RNA polymerase II access or repress gene expression during vegetative growth. Our results demonstrate that Red1 partners with other proteins to silence meiotic gene expression at the post-transcriptional level. Conservation of a NURS-like complex in human cells suggests that this pathway plays an ancient and fundamental role in RNA silencing.

Indexed as

Carrier ProteinsChromatinExosomesGene Expression Regulation, FungalHistonesMeiosisMethylationmRNA Cleavage and Polyadenylation FactorsRNA InterferenceRNA, MessengerRNA, NuclearRNA Polymerase IIRNA StabilitySchizosaccharomyces pombe ProteinsCarrier ProteinsChromatinHistonesMmi1 protein, S pombemRNA Cleavage and Polyadenylation FactorsRed1 protein, S pombeRNA, MessengerRNA, NuclearRNA Polymerase IISchizosaccharomyces pombe Proteinsfission yeastH3K9 methylationmeiosismRNA degradationnuclear bodiesRed1

Identifiers

PMID24713849
PMCPMC4024641
OpenAlexW2146274359

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.