Evidence map›Paper›PMID 24711446›Full record

ArticleThe Journal of biological chemistry2014

Solution structure and DNA-binding properties of the winged helix domain of the meiotic recombination HOP2 protein.

Hem Moktan, Michel F Guiraldelli, Craig A Eyster, Weixing Zhao, Chih-Ying Lee, Timothy Mather, R Daniel Camerini-Otero, Patrick Sung, Donghua H Zhou, Roberto J Pezza

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. The Arabidopsis HOP2 gene has a role in preventing illegitimate connections between nonhomologous chromosome regions.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Hem MoktanFrom the Department of Physics, Oklahoma State University, Stillwater, Oklahoma 74078.
Michel F Guiraldellithe Cell Cycle and Cancer Biology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma 73104.
Craig A Eysterthe Cell Cycle and Cancer Biology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma 73104.
Weixing Zhaothe Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520.
Chih-Ying Leethe Cell Cycle and Cancer Biology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma 73104.
Timothy Matherthe Cardiovascular Biology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma 73104, the Department of Biochemistry and Molecular Biology, Oklahoma University Health Sciences Center, Oklahoma City, Oklahoma 73104.
R Daniel Camerini-Oterothe Genetics and Biochemistry Branch, NIDDK, National Institutes of Health, Bethesda, Maryland 20892, and.
Patrick Sungthe Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06520.
Donghua H ZhouFrom the Department of Physics, Oklahoma State University, Stillwater, Oklahoma 74078.
Roberto J Pezzathe Cell Cycle and Cancer Biology Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma 73104, the Department of Cell Biology, Oklahoma University Health Science Center, Oklahoma City, Oklahoma 73126 Roberto-Pezza@omrf.org.
Oklahoma Medical Research Foundation · USOklahoma State University · USYale University · USNational Institutes of Health · USOU Health

Funding

Yale University Clinical and Translational Science Award ProgramUL1TR000142 · NCATS · YALE UNIVERSITY · PI SHERWIN, ROBERT S · 2012 to 2015
$31.8M
Understanding connective tissue development and disease with PDGFR-driven..... P20GM103636 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI THOMPSON, LINDA F · 2013 to 2023
$26.9M
The different pathways involved in meiotic recombination in mammalsZIADK052033 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI CAMERINI-OTERO, RAFAEL · 2009 to 2017
$7.0M
Molecular Basis of BRCA2-mediated DNA Repair and Cancer AvoidanceR01ES015252 · NIEHS · YALE UNIVERSITY · PI SUNG, PATRICK · 2007 to 2016
$3.8M
Structural Investigation of Lipid Storage Protein by Solid-State NMRR15GM097713 · NIGMS · OKLAHOMA STATE UNIVERSITY STILLWATER · PI ZHOU, DONGHUA HOWARD · 2011 to 2011
$337k
NCATS NIH HHS UL1 TR000142NIEHS NIH HHS R01 ES015252NIGMS NIH HHS 1P20GM103636NIGMS NIH HHS GM097713NIGMS NIH HHS P20 GM103636NIGMS NIH HHS R15 GM097713
6 · The paper itself

Abstract

The HOP2 protein is required for efficient double-strand break repair which ensures the proper synapsis of homologous chromosomes and normal meiotic progression. We previously showed that in vitro HOP2 shows two distinctive activities: when it is incorporated into a HOP2-MND1 heterodimer, it stimulates DMC1 and RAD51 recombination activities, and the purified HOP2 alone is proficient in promoting strand invasion. The structural and biochemical basis of HOP2 action in recombination are poorly understood; therefore, they are the focus of this work. Herein, we present the solution structure of the amino-terminal portion of mouse HOP2, which contains a typical winged helix DNA-binding domain. Together with NMR spectral changes in the presence of double-stranded DNA, protein docking on DNA, and mutation analysis to identify the amino acids involved in DNA coordination, our results on the three-dimensional structure of HOP2 provide key information on the fundamental structural and biochemical requirements directing the interaction of HOP2 with DNA. These results, in combination with mutational experiments showing the role of a coiled-coil structural feature involved in HOP2 self-association, allow us to explain important aspects of the function of HOP2 in recombination.

Indexed as

Protein Structure, SecondaryProtein Structure, TertiaryAmino AcidsAmino Acid SequenceAnimalsBinding SitesCell Cycle ProteinsDNADNA-Binding ProteinsMagnetic Resonance SpectroscopyMiceModels, MolecularMolecular Sequence DataMutationNucleic Acid ConformationProtein BindingAmino AcidsCell Cycle ProteinsDNADNA-Binding ProteinsHop2 protein, mouseSolutionsDNA BindingDNA-binding ProteinDNA RepairHomologous RecombinationNMRProtein Structure

Identifiers

PMID24711446
PMCPMC4031524
OpenAlexW2122417936

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.