Evidence map›Paper›PMID 24711367›Full record

ArticleNucleic acids research2014

Bacteriophage λ N protein inhibits transcription slippage by Escherichia coli RNA polymerase.

Adam R Parks, Carolyn Court, Lucyna Lubkowska, Ding J Jin, Mikhail Kashlev, Donald L Court

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Low-level expression of the Type II restriction-modification system confers potent bacteriophage resistance in Escherichia coli.DNA research : an international journal for rapid publication of reports on genes and genomes · 2020
    Article
  4. Review
  5. Article
  6. Article
  7. Transcription elongation.Transcription · 2017
    Review
  8. Article
  9. Probing the structure of Nun transcription arrest factor bound to RNA polymerase.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  10. Article
  11. Review
  12. Review
  13. Productive mRNA stem loop-mediated transcriptional slippage: Crucial features in common with intrinsic terminators.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Adam R ParksMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA.
Carolyn CourtMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA.
Lucyna LubkowskaMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA.
Ding J JinMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA.
Mikhail KashlevMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA.
Donald L CourtMolecular Control and Genetics Section, Gene Regulation and Chromosome Biology, National Cancer Institute at Frederick, National Institutes of Health, Frederick, MD 21702-1201, USA courtd@mail.nih.gov.
Frederick National Laboratory for Cancer Research · USNational Cancer Institute · USNational Institutes of Health · US

Funding

Mechanisms of transcription pausing and fidelity in prokaryotes and eukaryotesZIABC010795 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KASHLEV, MIKHAIL · 2009 to 2025
$18.1M
Intramural NIH HHSPHS HHS HHSN261200800001E
6 · The paper itself

Abstract

Transcriptional slippage is a class of error in which ribonucleic acid (RNA) polymerase incorporates nucleotides out of register, with respect to the deoxyribonucleic acid (DNA) template. This phenomenon is involved in gene regulation mechanisms and in the development of diverse diseases. The bacteriophage λ N protein reduces transcriptional slippage within actively growing cells and in vitro. N appears to stabilize the RNA/DNA hybrid, particularly at the 5' end, preventing loss of register between transcript and template. This report provides the first evidence of a protein that directly influences transcriptional slippage, and provides a clue about the molecular mechanism of transcription termination and N-mediated antitermination.

Indexed as

Bacteriophage lambdaBase Sequencebeta-GalactosidaseDNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsGenes, ReporterTranscription, GeneticViral Regulatory and Accessory Proteinsbeta-GalactosidaseDNA-Directed RNA PolymerasesEscherichia coli ProteinsN protein, Bacteriophage lambdaViral Regulatory and Accessory Proteins

Identifiers

PMID24711367
PMCPMC4027172
OpenAlexW2160195257

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.