Evidence map›Paper›PMID 24708371›Full record

ArticleNeural computation2014

Motor cortex microcircuit simulation based on brain activity mapping.

George L Chadderdon, Ashutosh Mohan, Benjamin A Suter, Samuel A Neymotin, Cliff C Kerr, Joseph T Francis, Gordon M G Shepherd, William W Lytton

Abstract read
In one paragraph

Article in Neural computation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Major remaining gaps in models of sensorimotor systems.Frontiers in computational neuroscience · 2015
    Review
  11. Towards real-time communication betweenJournal of computational surgery · 2014
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

George L ChadderdonDepartment of Physiology and Pharmacology, SUNY Downstate, Brooklyn, NY 11203 gchadder3@gmail.com.
Ashutosh Mohan
Benjamin A Suter
Samuel A Neymotin
Cliff C Kerr
Joseph T Francis
Gordon M G Shepherd
William W Lytton

Funding

General Motor Control Mechanisms and Disease Training ProgramT32NS041234 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BEVAN, MARK D · 2001 to 2022
$6.0M
Synaptic Circuit Organization of Motor CortexR01NS061963 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHEPHERD, GORDON M · 2008 to 2022
$5.4M
Microconnectomics of neocortex: a multiscale computer modelU01EB017695 · NIBIB · SUNY DOWNSTATE MEDICAL CENTER · PI LYTTON, WILLIAM W · 2014 to 2017
$2.3M
NIBIB NIH HHS U01 EB017695NINDS NIH HHS R01 NS061963NINDS NIH HHS T32 NS041234NINDS NIH HHS T32NS041234
6 · The paper itself

Abstract

The deceptively simple laminar structure of neocortex belies the complexity of intra- and interlaminar connectivity. We developed a computational model based primarily on a unified set of brain activity mapping studies of mouse M1. The simulation consisted of 775 spiking neurons of 10 cell types with detailed population-to-population connectivity. Static analysis of connectivity with graph-theoretic tools revealed that the corticostriatal population showed strong centrality, suggesting that would provide a network hub. Subsequent dynamical analysis confirmed this observation, in addition to revealing network dynamics that cannot be readily predicted through analysis of the wiring diagram alone. Activation thresholds depended on the stimulated layer. Low stimulation produced transient activation, while stronger activation produced sustained oscillations where the threshold for sustained responses varied by layer: 13% in layer 2/3, 54% in layer 5A, 25% in layer 5B, and 17% in layer 6. The frequency and phase of the resulting oscillation also depended on stimulation layer. By demonstrating the effectiveness of combined static and dynamic analysis, our results show how static brain maps can be related to the results of brain activity mapping.

Indexed as

Models, NeurologicalAnimalsBrain MappingComputer SimulationMiceMotor CortexNeural PathwaysNeuronsPeriodicitySynapses

Identifiers

PMID24708371
PMCPMC4887269

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.