Evidence map›Paper›PMID 24707965›Full record

ArticleACS chemical biology2014

A selective phenelzine analogue inhibitor of histone demethylase LSD1.

Polina Prusevich, Jay H Kalin, Shonoi A Ming, Manuela Basso, Jeffrey Givens, Xin Li, Jianfei Hu, Martin S Taylor, Anne M Cieniewicz, Po-Yuan Hsiao and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in ACS chemical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 100 citations in OpenAlex.

  1. Review
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  14. Role of NADCellular and molecular neurobiology · 2023
    Review
  15. Review
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  17. Chemical modulation ofWellcome open research · 2023
    Article
  18. Review
  19. Article
  20. Genes · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 1 country.

Polina PrusevichDepartment of Pharmacology, ∥Center for Epigenetics and Department of Medicine, ⊥Department of Ophthalmology, and ¶The Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Johns Hopkins University School of Medicine , Baltimore, Maryland 21205, United States.
Jay H Kalin
Shonoi A Ming
Manuela Basso
Jeffrey Givens
Xin Li
Jianfei Hu
Martin S Taylor
Anne M Cieniewicz
Po-Yuan Hsiao
Rong Huang
Heather Roberson
Nkosi Adejola
Lindsay B Avery
Robert A Casero
Sean D Taverna
Jiang Qian
Alan J Tackett
Rajiv R Ratan
Oliver G McDonald
Andrew P Feinberg
Philip A Cole
Johns Hopkins University · USUniversity of Arkansas for Medical Sciences · USBurke Medical Research Institute · USCornell University · USVanderbilt University Medical Center · USVirginia Commonwealth University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007309 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 1985 to 2019
$43.2M
TCP5: ACTIVE SITE LABELING REAGENT FOR ACETYLTRANSFERASESU54RR020839 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 2004 to 2011
$27.4M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
MOLECULAR PATHOLOGY OF WILMS TUMOR RELATED GENES 11PR01CA054358 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ANDREW P. FEINBERG · 1991 to 2026
$5.5M
Spermine N1-Acetylase Induction in Lung CancersR01CA051085 · NCI · JOHNS HOPKINS UNIVERSITY · PI CASERO, ROBERT A. · 1990 to 2013
$4.7M
Protein Acylation and Methylation Mechanisms_Administrative SupplementR37GM062437 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI COLE, PHILIP A · 2013 to 2022
$4.1M
The Role of Polyamine Oxidase in Antitumor Drug ResponseR01CA098454 · NCI · JOHNS HOPKINS UNIVERSITY · PI CASERO, ROBERT A. · 2003 to 2013
$2.9M
Probing Enzymatic Lysine ModificationsF32GM108364 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KALIN, JAY HANS · 2014 to 2015
$106k
NCI NIH HHS R01 CA051085NCI NIH HHS R01 CA054358NCI NIH HHS R01 CA098454NCRR NIH HHS U54 RR020839NIGMS NIH HHS F32 GM108364NIGMS NIH HHS R37 GM062437NIGMS NIH HHS T32 GM007309NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

Lysine-specific demethylase 1 (LSD1) is an epigenetic enzyme that oxidatively cleaves methyl groups from monomethyl and dimethyl Lys4 of histone H3 (H3K4Me1, H3K4Me2) and can contribute to gene silencing. This study describes the design and synthesis of analogues of a monoamine oxidase antidepressant, phenelzine, and their LSD1 inhibitory properties. A novel phenelzine analogue (bizine) containing a phenyl-butyrylamide appendage was shown to be a potent LSD1 inhibitor in vitro and was selective versus monoamine oxidases A/B and the LSD1 homologue, LSD2. Bizine was found to be effective at modulating bulk histone methylation in cancer cells, and ChIP-seq experiments revealed a statistically significant overlap in the H3K4 methylation pattern of genes affected by bizine and those altered in LSD1-/- cells. Treatment of two cancer cell lines, LNCaP and H460, with bizine conferred a reduction in proliferation rate, and bizine showed additive to synergistic effects on cell growth when used in combination with two out of five HDAC inhibitors tested. Moreover, neurons exposed to oxidative stress were protected by the presence of bizine, suggesting potential applications in neurodegenerative disease.

Indexed as

AnimalsBlotting, WesternCells, CulturedCell SurvivalDNA MethylationEmbryo, MammalianEnzyme InhibitorsFetusHistone DemethylasesHistonesHumansMonoamine OxidaseNeuronsPhenelzineRatsRats, Sprague-DawleyEnzyme InhibitorsHistone DemethylasesHistonesKDM1A protein, humanMonoamine Oxidasemonoamine oxidase A, humanPhenelzine

Identifiers

PMID24707965
PMCPMC4076021
OpenAlexW2069010058

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.