Evidence map›Paper›PMID 24707292›Full record

ArticleInternational journal of microbiology2014

Type IV Secretion System Is Not Involved in Infection Process in Citrus.

Tiago Rinaldi Jacob, Marcelo Luiz de Laia, Leandro Marcio Moreira, Janaína Fernandes Gonçalves, Flavia Maria de Souza Carvalho, Maria Inês Tiraboschi Ferro, Jesus Aparecido Ferro

Open access · goldAbstract read
In one paragraph

Article in International journal of microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  3. Analyses of Seven New Genomes ofFrontiers in microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Tiago Rinaldi JacobFaculdade de Ciências Agrárias e Veterinárias de Jaboticabal, Departamento de Tecnologia, Universidade Estadual Paulista (UNESP), 14.884-900 Jaboticabal, SP, Brazil.
Marcelo Luiz de LaiaDepartamento de Engenharia Florestal, Faculdade de Ciências Agrárias, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 39.100-000 Diamantina, MG, Brazil.
Leandro Marcio MoreiraDepartamento de Ciências Biológicas (DECBI), Instituto de Ciências Exatas e Biológicas (ICEB) and Núcleo de Pesquisas em Ciências Biológicas (NUPEB), Universidade Federal de Ouro Preto, 35.400-000 Ouro Preto, MG, Brazil.
Janaína Fernandes GonçalvesDepartamento de Engenharia Florestal, Faculdade de Ciências Agrárias, Universidade Federal dos Vales do Jequitinhonha e Mucuri, 39.100-000 Diamantina, MG, Brazil.
Flavia Maria de Souza CarvalhoEmbrapa Informática Agropecuária, CNPTIA-EMBRAPA, Campinas, SP, Brazil.
Maria Inês Tiraboschi FerroFaculdade de Ciências Agrárias e Veterinárias de Jaboticabal, Departamento de Tecnologia, Universidade Estadual Paulista (UNESP), 14.884-900 Jaboticabal, SP, Brazil.
Jesus Aparecido FerroFaculdade de Ciências Agrárias e Veterinárias de Jaboticabal, Departamento de Tecnologia, Universidade Estadual Paulista (UNESP), 14.884-900 Jaboticabal, SP, Brazil.
Universidade Estadual Paulista (Unesp) · BRUniversidade Federal dos Vales do Jequitinhonha e Mucuri · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal de Ouro Preto · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type IV secretion system (T4SS) is used by Gram-negative bacteria to translocate protein and DNA substrates across the cell envelope and into target cells. Xanthomonas citri subsp. citri contains two copies of the T4SS, one in the chromosome and the other is plasmid-encoded. To understand the conditions that induce expression of the T4SS in Xcc, we analyzed, in vitro and in planta, the expression of 18 ORFs from the T4SS and 7 hypothetical flanking genes by RT-qPCR. As a positive control, we also evaluated the expression of 29 ORFs from the type III secretion system (T3SS), since these genes are known to be expressed during plant infection condition, but not necessarily in standard culture medium. From the 29 T3SS genes analyzed by qPCR, only hrpA was downregulated at 72 h after inoculation. All genes associated with the T4SS were downregulated on Citrus leaves 72 h after inoculation. Our results showed that unlike the T3SS, the T4SS is not induced during the infection process.

Identifiers

PMID24707292
PMCPMC3953393
OpenAlexW1994420130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.