Evidence map›Paper›PMID 24706895›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Dynamic gene expression by putative hair-cell progenitors during regeneration in the zebrafish lateral line.

Aaron B Steiner, Taeryn Kim, Victoria Cabot, A J Hudspeth

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
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  14. Article
  15. How Zebrafish Can Drive the Future of Genetic-based Hearing and Balance Research.Journal of the Association for Research in Otolaryngology : JARO · 2021
    Review
  16. Article
  17. Unraveling the Molecular Players at the Cholinergic Efferent Synapse of the Zebrafish Lateral Line.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  18. Review
  19. Characterization of the Zebrafish Cell Landscape at Single-Cell Resolution.Frontiers in cell and developmental biology · 2021
    Article
  20. Single-Cell Sequencing Applications in the Inner Ear.Frontiers in cell and developmental biology · 2021
    Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Aaron B SteinerHoward Hughes Medical Institute and Laboratory of Sensory Neuroscience, The Rockefeller University, New York, NY 10065.
Taeryn Kim
Victoria Cabot
A J Hudspeth
Howard Hughes Medical Institute · USRockefeller University · US

Funding

TRANSDUCTION MECHANISM OF HAIR CELLSR01DC000241 · NIDCD · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI HUDSPETH, ALBERT JAMES · 1989 to 2011
$4.1M
Gene-Expression Patterns During Hair-Cell RegenerationRC1DC010609 · NIDCD · ROCKEFELLER UNIVERSITY · PI HUDSPETH, ALBERT JAMES · 2009 to 2010
$451k
ELECTROPHYSIOLOGICAL STUDIES OF THE VOMERONASAL SYSTEMF32DC000241 · NIDCD · WORCESTER FOUNDATION FOR BIOMEDICAL RES · PI JANG, TAICHANG · 1996 to 1998
–
Howard Hughes Medical InstituteNIDCD NIH HHS DC00241NIDCD NIH HHS DC10609NIDCD NIH HHS F32 DC000241NIDCD NIH HHS R01 DC000241NIDCD NIH HHS RC1 DC010609
6 · The paper itself

Abstract

Hearing loss is most commonly caused by the destruction of mechanosensory hair cells in the ear. This condition is usually permanent: Despite the presence of putative hair-cell progenitors in the cochlea, hair cells are not naturally replenished in adult mammals. Unlike those of the mammalian ear, the progenitor cells of nonmammalian vertebrates can regenerate hair cells throughout life. The basis of this difference remains largely unexplored but may lie in molecular dissimilarities that affect how progenitors respond to hair-cell death. To approach this issue, we analyzed gene expression in hair-cell progenitors of the lateral-line system. We developed a transgenic line of zebrafish that expresses a red fluorescent protein in the presumptive hair-cell progenitors known as mantle cells. Fluorescence-activated cell sorting from the skins of transgenic larvae, followed by microarray-based expression analysis, revealed a constellation of transcripts that are specifically enriched in these cells. Gene expression analysis after hair-cell ablation uncovered a cohort of genes that are differentially regulated early in regeneration, suggesting possible roles in the response of progenitors to hair-cell death. These results provide a resource for studying hair-cell regeneration and the biology of sensory progenitor cells.

Indexed as

Gene Expression ProfilingRegenerationAnimalsAnimals, Genetically ModifiedBase SequenceDNA PrimersFlow CytometryHair Cells, AuditoryIn Situ HybridizationOligonucleotide Array Sequence AnalysisPolymerase Chain ReactionRNA, MessengerZebrafishDNA PrimersRNA, Messengeralkaline phosphataseauditoryneuromastsupporting cell

Identifiers

PMID24706895
PMCPMC3986164
OpenAlexW2151216916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.