Evidence map›Paper›PMID 24706755›Full record

ArticleThe Journal of biological chemistry2014

Heterologous Src homology 4 domains support membrane anchoring and biological activity of HIV-1 Nef.

Miriam M Geist, Xiaoyu Pan, Silke Bender, Ralf Bartenschlager, Walter Nickel, Oliver T Fackler

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Miriam M GeistFrom the Department of Infectious Diseases, Integrative Virology and.
Xiaoyu PanFrom the Department of Infectious Diseases, Integrative Virology and.
Silke BenderMolecular Virology, University Hospital Heidelberg,69120 Heidelberg, Germany and.
Ralf BartenschlagerMolecular Virology, University Hospital Heidelberg,69120 Heidelberg, Germany and.
Walter Nickelthe Biochemistry Center, Heidelberg University, 69120 Heidelberg, Germany.
Oliver T FacklerFrom the Department of Infectious Diseases, Integrative Virology and oliver.fackler@med.uni-heidelberg.de.
Heidelberg University · DEUniversity Hospital Heidelberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The HIV-1 pathogenicity factor Nef enhances viral replication by modulation of multiple host cell transport and signaling pathways. Nef associates with membranes via an N-terminal Src homology 4 (SH4) domain, and membrane association is believed to be essential for its biological functions. At which subcellular site(s) Nef exerts its different functions and how kinetics of membrane interactions contribute to its biological activity are unknown. To address how specific characteristics of Nef membrane association affect its biological properties, the SH4 domain of Nef was replaced by heterologous membrane targeting domains. The use of a panel of heterologous SH4 domains resulted in chimeric Nef proteins with distinct steady state subcellular localization, membrane association efficiency, and anterograde transport routes. Irrespective of these modifications, cardinal Nef functions affecting host cell vesicular transport and actin dynamics were fully preserved. In contrast, stable targeting of Nef to the surface of mitochondria, peroxisomes, or the Golgi apparatus, and thus prevention of plasma membrane delivery, caused potent and broad loss of Nef activity. These results support the concept that Nef adopts its active conformation in the membrane-associated state but exclude that membrane-associated Nef simply acts by recruiting soluble factors independently of its local microenvironment. Rather than its steady state subcellular localization or membrane affinity, the ability to undergo dynamic anterograde and internalization cycles appear to determine Nef function. These results reveal that functional membrane interactions of Nef underlie critical spatiotemporal regulation and suggest that delivery to distinct subcellular sites via such transport cycles provides the basis for the multifunctionality of Nef.

Indexed as

HIV-1Amino Acid SequenceAnimalsCell MembraneHumansIntracellular SpaceJurkat CellsMiceMolecular Sequence Datanef Gene Products, Human Immunodeficiency VirusNIH 3T3 CellsProtein Structure, TertiaryProtein TransportRecombinant Fusion Proteinsnef Gene Products, Human Immunodeficiency VirusRecombinant Fusion ProteinsHost-Pathogen InteractionsHuman Immunodeficiency VirusMembrane TraffickingNefPlasma MembraneSH4 DomainViral Protein

Identifiers

PMID24706755
PMCPMC4022873
OpenAlexW2070836019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.