Evidence map›Paper›PMID 24706550›Full record

ArticlePlant physiology2014

The Polyadenylation Factor Subunit CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30: A Key Factor of Programmed Cell Death and a Regulator of Immunity in Arabidopsis.

Quentin Bruggeman, Marie Garmier, Linda de Bont, Ludivine Soubigou-Taconnat, Christelle Mazubert, Moussa Benhamed, Cécile Raynaud, Catherine Bergounioux, Marianne Delarue

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 64 citations in OpenAlex.

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  15. Hormone Regulation of CCCH Zinc Finger Proteins in Plants.International journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Inositol Improves Cold Tolerance Through InhibitingFrontiers in plant science · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Quentin BruggemanUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Marie GarmierUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Linda de BontUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Ludivine Soubigou-TaconnatUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Christelle MazubertUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Moussa BenhamedUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Cécile RaynaudUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Catherine BergouniouxUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.).
Marianne DelarueUniversité Paris-Sud, Institut de Biologie des Plantes, Unité Mixte de Recherche Centre National de la Recherche Scientifique 8618, Saclay Plant Sciences, F-91405 Orsay, France (Q.B., M.G., L.d.B., C.M., M.B., C.R., C.B., M.D.);Unité de Recherche en Génomique Végétale-Unité Mixte de Recherche-Institut National de la Recherche Agronomique 1165-Centre National de la Recherche Scientifique 8114, 91 057 Evry cedex, France (L.S.-T.); andDivision of Biological and Environmental Sciences and Engineering and Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia (M.B.) marianne.delarue@u-psud.fr.
Université Paris-Sud · FRCentre National de la Recherche Scientifique · FRInstitut de Biologie Moléculaire des Plantes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Programmed cell death (PCD) is essential for several aspects of plant life, including development and stress responses. Indeed, incompatible plant-pathogen interactions are well known to induce the hypersensitive response, a localized cell death. Mutational analyses have identified several key PCD components, and we recently identified the mips1 mutant of Arabidopsis (Arabidopsis thaliana), which is deficient for the key enzyme catalyzing the limiting step of myoinositol synthesis. One of the most striking features of mips1 is the light-dependent formation of lesions on leaves due to salicylic acid (SA)-dependent PCD, revealing roles for myoinositol or inositol derivatives in the regulation of PCD. Here, we identified a regulator of plant PCD by screening for mutants that display transcriptomic profiles opposing that of the mips1 mutant. Our screen identified the oxt6 mutant, which has been described previously as being tolerant to oxidative stress. In the oxt6 mutant, a transfer DNA is inserted in the CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30 (CPSF30) gene, which encodes a polyadenylation factor subunit homolog. We show that CPSF30 is required for lesion formation in mips1 via SA-dependent signaling, that the prodeath function of CPSF30 is not mediated by changes in the glutathione status, and that CPSF30 activity is required for Pseudomonas syringae resistance. We also show that the oxt6 mutation suppresses cell death in other lesion-mimic mutants, including lesion-simulating disease1, mitogen-activated protein kinase4, constitutive expressor of pathogenesis-related genes5, and catalase2, suggesting that CPSF30 and, thus, the control of messenger RNA 3' end processing, through the regulation of SA production, is a key component of plant immune responses.

Identifiers

PMID24706550
PMCPMC4044851
OpenAlexW2056354957

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.