Evidence map›Paper›PMID 24706167›Full record

ArticleBreast cancer research and treatment2014

Genetic heterogeneity beyond CYP2C8*3 does not explain differential sensitivity to paclitaxel-induced neuropathy.

Daniel L Hertz, Siddharth Roy, John Jack, Alison A Motsinger-Reif, Amy Drobish, L Scott Clark, Lisa A Carey, E Claire Dees, Howard L McLeod

Open access · greenAbstract read
In one paragraph

Article in Breast cancer research and treatment, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Review
  5. Article
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  7. Omics Technologies Improving Breast Cancer Research and Diagnostics.International journal of molecular sciences · 2023
    Review
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  10. Article
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  12. Article
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  15. Biological predictors of chemotherapy-induced peripheral neuropathy (CIPN): MASCC neurological complications working group overview.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2019
    Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Daniel L HertzDepartment of Clinical, Social, and Administrative Sciences, University of Michigan College of Pharmacy, 428 Church St, Ann Arbor, MI, 48109, USA, dlhertz@med.umich.edu.
Siddharth Roy
John Jack
Alison A Motsinger-Reif
Amy Drobish
L Scott Clark
Lisa A Carey
E Claire Dees
Howard L McLeod
North Carolina State University · USUniversity of North Carolina at Chapel Hill · USMoffitt Cancer Center · USTris Pharma (United States) · USUNC Lineberger Comprehensive Cancer CenterUniversity of Michigan–Ann Arbor · US

Funding

Tissue Procurement & PathologyP50CA058223 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KATHERINE A. HOADLEY · 1992 to 2026
$59.3M
UNC CLINICAL AND TRANSLATIONAL SCIENCE AWARD: BPCAUL1RR025747 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RUNGE, MARSCHALL S. · 2008 to 2011
$44.6M
Biostatistics Training in the Omics EraT32GM081057 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MUSE, SPENCER V. · 2007 to 2019
$2.5M
Genetic Basis of Genotype-by-Environment Interactions Underlying Physiological MoR01GM098856 · NIGMS · UNIVERSITY OF ALABAMA IN TUSCALOOSA · PI MOTSINGER-REIF, ALISON, REED, LAURA K · 2011 to 2015
$1.3M
NCI NIH HHS 5P50CA058223NCI NIH HHS P50 CA058223NCRR NIH HHS 5UL1RR025747-04NCRR NIH HHS UL1 RR025747NIGMS NIH HHS R01 GM098856NIGMS NIH HHS T32 GM081057NIGMS NIH HHS T32GM081057
6 · The paper itself

Abstract

The development of paclitaxel-induced peripheral neuropathy (PIPN) is influenced by drug exposure and patient genetics. The purpose of this analysis was to expand on a previous reported association of CYP2C8*3 and PIPN risk by investigating additional polymorphisms in CYP2C8 and in hundreds of other genes potentially relevant to paclitaxel pharmacokinetics. Clinical data was collected prospectively in an observational registry of newly diagnosed breast cancer patients. Patients treated with paclitaxel-containing regimens were genotyped using the Affymetrix DMET™ Plus chip. Patients who carried the CYP2C8*2, *3, or *4 variant were collapsed into a low-metabolizer CYP2C8 phenotype for association with PIPN. Separately, all SNPs that surpassed quality control were assessed individually and as a composite of genetic ancestry for associations with PIPN. 412 paclitaxel-treated patients and 564 genetic markers were included in the analysis. The risk of PIPN was significantly greater in the CYP2C8 low-metabolizer group (HR = 1.722, p = 0.018); however, the influences of the *2 and *4 SNPs were not independently significant (*2: p = 0.847, *4: p = 0.408). One intronic SNP in ABCG1 (rs492338) surpassed the exploratory significance threshold for an association with PIPN in the Caucasian cohort (p = 0.0008) but not in the non-Caucasian replication group (p = 0.54). Substantial genetic variability was observed within self-reported racial groups but this genetic variability was not associated with risk of grade 2+ PIPN. The pharmacogenetic heterogeneity within a cohort of breast cancer patients is dramatic, though we did not find evidence that this heterogeneity directly influences the risk of PIPN beyond the contribution of CYP2C8*3.

Indexed as

AdultAgedAged, 80 and overAntineoplastic AgentsBreast NeoplasmsCytochrome P-450 CYP2C8Drug Resistance, NeoplasmFemaleGenetic HeterogeneityGenetic Predisposition to DiseaseGenotypeHumansMiddle AgedOligonucleotide Array Sequence AnalysisPaclitaxelPeripheral Nervous System DiseasesAntineoplastic AgentsCytochrome P-450 CYP2C8Paclitaxel

Identifiers

PMID24706167
PMCPMC4256153
OpenAlexW2033123989

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.