Evidence map›Paper›PMID 24704387›Full record

ArticleBiology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation2014

Proteomic analysis of saliva from patients with oral chronic graft-versus-host disease.

Ivana Devic, Min Shi, Mark M Schubert, Michele Lloid, Kenneth T Izutsu, Catherine Pan, Melody Missaghi, Thomas H Morton, Lloyd A Mancl, Jing Zhang and 1 more

Abstract read
In one paragraph

Article in Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Saliva proteomics updates in biomedicine.Journal of biological research (Thessalonike, Greece) · 2019
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Salivary biomarkers and proteomics: future diagnostic and clinical utilities.Acta otorhinolaryngologica Italica : organo ufficiale della Societa italiana di otorinolaringologia e chirurgia cervico-facciale · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Ivana DevicDepartment of Pathology, University of Washington, Seattle, Washington.
Min ShiDepartment of Pathology, University of Washington, Seattle, Washington.
Mark M SchubertDepartment of Oral Medicine, University of Washington, Seattle, Washington; Seattle Cancer Care Alliance, Seattle, Washington; Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Michele LloidDepartment of Oral Medicine, University of Washington, Seattle, Washington; Seattle Cancer Care Alliance, Seattle, Washington.
Kenneth T IzutsuDepartment of Oral Health Sciences, University of Washington, Seattle, Washington.
Catherine PanDepartment of Pathology, University of Washington, Seattle, Washington.
Melody MissaghiDepartment of Oral Health Sciences, University of Washington, Seattle, Washington.
Thomas H MortonDepartment of Oral Health Sciences, University of Washington, Seattle, Washington.
Lloyd A ManclDepartment of Oral Health Sciences, University of Washington, Seattle, Washington.
Jing ZhangDepartment of Pathology, University of Washington, Seattle, Washington.
Richard B PreslandDepartment of Oral Health Sciences, University of Washington, Seattle, Washington; Division of Dermatology, Department of Medicine, University of Washington, Seattle, Washington. Electronic address: rp@uw.edu.
University of Washington · USSeattle Cancer Care Alliance · US

Funding

Salivary Biomarkers for Graft versus Host DiseaseR21DE017634 · NIDCR · UNIVERSITY OF WASHINGTON · PI PRESLAND, RICHARD B. · 2008 to 2009
$429k
NIDCR NIH HHS 1R21DE017634-01A2NIDCR NIH HHS 5R21DE017634-02NIDCR NIH HHS R21 DE017634
6 · The paper itself

Abstract

Chronic graft-versus-host disease (cGVHD) is an immune-mediated disorder and is the major long-term complication of allogeneic hematopoietic stem cell transplantation (allo-HSCT). The oral mucosa, including the salivary glands, is affected in the majority of patients with cGVHD; however, at present there is only a limited understanding of disease pathobiology. In this study, we performed a quantitative proteomic analysis of saliva pooled from patients with and without oral cGVHD-cGVHD(+) and cGVHD(-), respectively-using isobaric tags for relative and absolute quantification labeling, followed by tandem mass spectrometry. Among 249 salivary proteins identified by tandem mass spectrometry, 82 exhibited altered expression in the oral cGVHD(+) group compared with the cGVHD(-) group. Many of the identified proteins function in innate or acquired immunity, or are associated with tissue maintenance functions, such as proteolysis or the cytoskeleton. Using ELISA immunoassays, we further confirmed that 2 of these proteins, IL-1 receptor antagonist and cystatin B, showed decreased expression in patients with active oral cGVHD (P < .003). Receiver operating curve characteristic analysis revealed that these 2 markers were able to distinguish oral cGVHD with a sensitivity of 85% and specificity of 60%, and showed slightly better discrimination in newly diagnosed patients evaluated within 12 months of allo-HSCT (sensitivity, 92%; specificity 73%). In addition to identifying novel potential salivary cGVHD biomarkers, our study demonstrates that there is coordinated regulation of protein families involved in inflammation, antimicrobial defense, and tissue protection in oral cGVHD that also may reflect changes in salivary gland function and damage to the oral mucosa.

Indexed as

AdultAgedChronic DiseaseFemaleGraft vs Host DiseaseHumansMaleMass SpectrometryMiddle AgedMouth DiseasesMouth MucosaProteomicsSalivaBiomarker discoveryChronic graft-versus-host diseaseiTRAQ mass spectrometryProteomicsSaliva

Identifiers

PMID24704387
PMCPMC4552451
OpenAlexW2033308434

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.