Evidence map›Paper›PMID 24703711›Full record

ArticleCell2014

A single oncogenic enhancer rearrangement causes concomitant EVI1 and GATA2 deregulation in leukemia.

Stefan Gröschel, Mathijs A Sanders, Remco Hoogenboezem, Elzo de Wit, Britta A M Bouwman, Claudia Erpelinck, Vincent H J van der Velden, Marije Havermans, Roberto Avellino, Kirsten van Lom and 11 more

Open access · bronzeAbstract read
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In one paragraph

Article in Cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 419 papers.

0numbers the graph read from it
0cells of the map it votes in
419citing papers in PubMed
27.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

419 citing papers in PubMed, 705 citations in OpenAlex.

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359 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 3 countries.

Stefan GröschelDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands; Department of Internal Medicine III, Ulm University Hospital, 89081 Ulm, Germany.
Mathijs A SandersDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Remco HoogenboezemDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Elzo de WitHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, 3584 CT, the Netherlands.
Britta A M BouwmanHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, 3584 CT, the Netherlands.
Claudia ErpelinckDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Vincent H J van der VeldenDepartment of Immunology, Erasmus University Medical Center, Rotterdam, 3015 CN, the Netherlands.
Marije HavermansDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Roberto AvellinoDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Kirsten van LomDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Elwin J RomboutsDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Mark van DuinDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Konstanze DöhnerDepartment of Internal Medicine III, Ulm University Hospital, 89081 Ulm, Germany.
H Berna BeverlooDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands; Dutch Working Group on Hemato-Oncologic Genome Diagnostics, Rotterdam, 3015 GE, the Netherlands.
James E BradnerDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA; Department of Medicine, Harvard Medical School, Boston, MA 02115, USA.
Hartmut DöhnerDepartment of Internal Medicine III, Ulm University Hospital, 89081 Ulm, Germany.
Bob LöwenbergDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Peter J M ValkDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Eric M J BindelsDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands.
Wouter de LaatHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, 3584 CT, the Netherlands.
Ruud DelwelDepartment of Hematology, Erasmus University Medical Center, Rotterdam, 3015 GE, the Netherlands. Electronic address: h.delwel@erasmusmc.nl.
Erasmus MC · NLHubrecht Institute for Developmental Biology and Stem Cell Research · NLUniversity Hospital Ulm · DEHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromosomal rearrangements without gene fusions have been implicated in leukemogenesis by causing deregulation of proto-oncogenes via relocation of cryptic regulatory DNA elements. AML with inv(3)/t(3;3) is associated with aberrant expression of the stem-cell regulator EVI1. Applying functional genomics and genome-engineering, we demonstrate that both 3q rearrangements reposition a distal GATA2 enhancer to ectopically activate EVI1 and simultaneously confer GATA2 functional haploinsufficiency, previously identified as the cause of sporadic familial AML/MDS and MonoMac/Emberger syndromes. Genomic excision of the ectopic enhancer restored EVI1 silencing and led to growth inhibition and differentiation of AML cells, which could be replicated by pharmacologic BET inhibition. Our data show that structural rearrangements involving the chromosomal repositioning of a single enhancer can cause deregulation of two unrelated distal genes, with cancer as the outcome.

Indexed as

Chromosomes, Human, Pair 3Enhancer Elements, GeneticGene Expression Regulation, NeoplasticCell Line, TumorChromosome InversionDNA-Binding ProteinsGATA2 Transcription FactorHumansLeukemia, Myeloid, AcuteMDS1 and EVI1 Complex Locus ProteinMyelodysplastic SyndromesPromoter Regions, GeneticProto-OncogenesTranscriptional ActivationTranscription FactorsTranslocation, GeneticDNA-Binding ProteinsGATA2 Transcription FactorMDS1 and EVI1 Complex Locus ProteinMECOM protein, humanTranscription Factors

Identifiers

PMID24703711
OpenAlexW1978902427

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.