Evidence map›Paper›PMID 24703701›Full record

ArticleCell metabolism2014

Obesity, rather than diet, drives epigenomic alterations in colonic epithelium resembling cancer progression.

Ruifang Li, Sara A Grimm, Kaliopi Chrysovergis, Justin Kosak, Xingya Wang, Ying Du, Adam Burkholder, Kyathanahalli Janardhan, Deepak Mav, Ruchir Shah and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell metabolism, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Diet-induced chromatin states influence intestinal stem cell memory.bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Observational
  7. Review
  8. Article
  9. Obesity and Colorectal Cancer: A Narrative Review.Medicina (Kaunas, Lithuania) · 2024
    Review
  10. Article
  11. Article
  12. Metabolism, metabolites, and macrophages in cancer.Journal of hematology & oncology · 2023
    Review
  13. Obesity associated cancers, genetics, epigenetics and elephants.Journal of translational genetics and genomics · 2023
    Article
  14. Epigenetic effects of high-fat diet on intestinal tumorigenesis in C57BL/6J-Journal of translational genetics and genomics · 2023
    Article
  15. Implication of gut microbes and its metabolites in colorectal cancer.Journal of cancer research and clinical oncology · 2023
    Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Ruifang LiLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Sara A GrimmIntegrative Bioinformatics, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Kaliopi ChrysovergisLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Justin KosakLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Xingya WangLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Ying DuIntegrative Bioinformatics, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Adam BurkholderIntegrative Bioinformatics, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Kyathanahalli JanardhanILS, Inc and Cellular and Molecular Pathology, DNTP, Research Triangle Park, NC 27709, USA.
Deepak MavSRA International, Inc., Durham, NC 27709, USA.
Ruchir ShahSRA International, Inc., Durham, NC 27709, USA.
Thomas E ElingLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA.
Paul A WadeLaboratory of Molecular Carcinogenesis, National Institute of Environmental Health Sciences, Research Triangle Park, NC 27709, USA. Electronic address: wadep2@niehs.nih.gov.
National Institute of Environmental Health Sciences · USSRA International (United States) · USResearch Triangle Park Foundation · US

Funding

Eukaryotic Transcriptional RegulationZIAES101965 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WADE, PAUL A · 2009 to 2025
$40.9M
Eukaryotic Transcriptional RegulationZ01ES101965 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WADE, PAUL A · 2005 to 2008
$3.5M
Intramural NIH HHS Z01 ES101965Intramural NIH HHS ZIA ES101965NIEHS NIH HHS ZO1ES101965
6 · The paper itself

Abstract

While obesity represents one of several risk factors for colorectal cancer in humans, the mechanistic underpinnings of this association remain unresolved. Environmental stimuli, including diet, can alter the epigenetic landscape of DNA cis-regulatory elements affecting gene expression and phenotype. Here, we explored the impact of diet and obesity on gene expression and the enhancer landscape in murine colonic epithelium. Obesity led to the accumulation of histone modifications associated with active enhancers at genomic loci downstream of signaling pathways integral to the initiation and progression of colon cancer. Meanwhile, colon-specific enhancers lost the same histone mark, poising cells for loss of differentiation. These alterations reflect a transcriptional program with many features shared with the program driving colon cancer progression. The interrogation of enhancer alterations by diet in colonic epithelium provides insights into the biology underlying high-fat diet and obesity as risk factors for colon cancer.

Indexed as

AnimalsBase SequenceChromatin ImmunoprecipitationColorectal NeoplasmsDiet, High-FatEnhancer Elements, GeneticEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHistonesIntestinal MucosaMiceMice, TransgenicMolecular Sequence DataObesitySignal TransductionHistones

Identifiers

PMID24703701
PMCPMC4050048
OpenAlexW2054141897

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.