Evidence map›Paper›PMID 24700818›Full record

ArticleDevelopment (Cambridge, England)2014

A Gli silencer is required for robust repression of gremlin in the vertebrate limb bud.

Qiang Li, Jordan P Lewandowski, Marian B Powell, Jacqueline L Norrie, Seung Hee Cho, Steven A Vokes

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Timing is everything: Transcriptional repression is not the default mode for regulating Hedgehog signaling.BioEssays : news and reviews in molecular, cellular and developmental biology · 2022
    Article
  4. Downregulation of Grem1 expression in the distal limb mesoderm is a necessary precondition for phalanx development.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Transcriptional regulation of graded Hedgehog signaling.Seminars in cell & developmental biology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Qiang LiDepartment of Molecular Biosciences, Institute for Cellular and Molecular Biology, University of Texas at Austin, 2500 Speedway Stop A4800, Austin, TX 78712, USA.
Jordan P Lewandowski
Marian B Powell
Jacqueline L Norrie
Seung Hee Cho
Steven A Vokes
The University of Texas at Austin · US

Funding

Cis-regulatory circuitry underlying Hedgehog mediated limb developmentR01HD073151 · NICHD · UNIVERSITY OF TEXAS AT AUSTIN · PI Steven Alexander Vokes · 2012 to 2026
$5.1M
NICHD NIH HHS R01 HD073151NICHD NIH HHS R01HD073151
6 · The paper itself

Abstract

The transcriptional response to the Hedgehog (Hh) pathway is mediated by Gli proteins, which function as context-dependent transcriptional activators or repressors. However, the mechanism by which Gli proteins regulate their target genes is poorly understood. Here, we have performed the first genetic characterization of a Gli-dependent cis-regulatory module (CRM), focusing on its regulation of Grem1 in the mouse limb bud. The CRM, termed GRE1 (Gli responsive element 1), can act as both an enhancer and a silencer. The enhancer activity requires sustained Hh signaling. As a Gli-dependent silencer, GRE1 prevents ectopic transcription of Grem1 driven through additional CRMs. In doing so, GRE1 works with additional GREs to robustly regulate Grem1. We suggest that multiple Gli CRMs may be a general mechanism for mediating a robust transcriptional response to the Hh pathway.

Indexed as

AnimalsCytokinesEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalHedgehog ProteinsIntercellular Signaling Peptides and ProteinsKruppel-Like Transcription FactorsLimb BudsMiceModels, BiologicalRepressor ProteinsSignal TransductionTime FactorsVertebratesZinc Finger Protein GLI1CytokinesGli1 protein, mouseGrem1 protein, mouseHedgehog ProteinsIntercellular Signaling Peptides and ProteinsKruppel-Like Transcription FactorsRepressor ProteinsShh protein, mouseZinc Finger Protein GLI1EnhancerGliGremlinLimb developmentMouseSilencerSonic Hedgehog

Identifiers

PMID24700818
PMCPMC3994773
OpenAlexW2143022314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.