Evidence map›Paper›PMID 24699731›Full record

ArticleActa crystallographica. Section F, Structural biology communications2014

1.15 Å resolution structure of the proteasome-assembly chaperone Nas2 PDZ domain.

Chingakham R Singh, Scott Lovell, Nurjahan Mehzabeen, Wasimul Q Chowdhury, Eric S Geanes, Kevin P Battaile, Jeroen Roelofs

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Ubiquitin-dependent switch during assembly of the proteasomal ATPases mediated by Not4 ubiquitin ligase.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Chingakham R SinghDivision of Biology, Kansas State University, 338 Ackert Hall, Manhattan, KS 66506, USA.
Scott LovellProtein Structure Laboratory, University of Kansas, Del Shankel Structural Biology Center, Lawrence, KS 66047, USA.
Nurjahan MehzabeenProtein Structure Laboratory, University of Kansas, Del Shankel Structural Biology Center, Lawrence, KS 66047, USA.
Wasimul Q ChowdhuryDivision of Biology, Kansas State University, 338 Ackert Hall, Manhattan, KS 66506, USA.
Eric S GeanesDivision of Biology, Kansas State University, 338 Ackert Hall, Manhattan, KS 66506, USA.
Kevin P BattaileIMCA-CAT Hauptman-Woodward Medical Research Institute, 9700 South Cass Avenue, Building 435A, Argonne, IL 60439, USA.
Jeroen RoelofsDivision of Biology, Kansas State University, 338 Ackert Hall, Manhattan, KS 66506, USA.
Kansas State University · USUniversity of Kansas · USHauptman-Woodward Medical Research Institute · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SUSAN J. BROWN · 2012 to 2026
$63.0M
UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI GEIGER, PAIGE C · 2001 to 2011
$38.1M
TRAFFICKING OF THE PLASMA MEMBRANE CA2+-ATPASE TO RAFTSP20RR017708 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI FISCHER, CHRISTOPHER JAMES · 2002 to 2011
$20.1M
Protein Structure and FunctionP20GM103420 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2012 to 2012
$2.0M
NCRR NIH HHS 5P20RR017708NCRR NIH HHS P20 RR016475NCRR NIH HHS P20 RR017708NIGMS NIH HHS 8 P20 GM103420NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P20 GM103420
6 · The paper itself

Abstract

The 26S proteasome is a 2.5 MDa protease dedicated to the degradation of ubiquitinated proteins in eukaryotes. The assembly of this complex containing 66 polypeptides is assisted by at least nine proteasome-specific chaperones. One of these, Nas2, binds to the proteasomal AAA-ATPase subunit Rpt5. The PDZ domain of Nas2 binds to the C-terminal tail of Rpt5; however, it does not require the C-terminus of Rpt5 for binding. Here, the 1.15 Å resolution structure of the PDZ domain of Nas2 is reported. This structure will provide a basis for further insights regarding the structure and function of Nas2 in proteasome assembly.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceCrystallizationCrystallography, X-RayModels, MolecularMolecular ChaperonesMolecular Sequence DataPDZ DomainsProtein ConformationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence Homology, Amino AcidAdenosine TriphosphatasesMolecular ChaperonesNAS2 protein, S cerevisiaeRPT5 protein, S cerevisiaeSaccharomyces cerevisiae ProteinschaperonesNas2PDZ domainproteasome

Identifiers

PMID24699731
PMCPMC3976055
OpenAlexW2122737593

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.