Evidence map›Paper›PMID 24695807›Full record

ArticlePloS one2014

The Toll-like receptor 4 polymorphism Asp299Gly but not Thr399Ile influences TLR4 signaling and function.

Huaicong Long, Brian P O'Connor, Rachel L Zemans, Xiaofang Zhou, Ivana V Yang, David A Schwartz

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 60 citations in OpenAlex.

  1. Association between TLR4 A299G polymorphism and pneumonia risk: a meta-analysis.Medical science monitor : international medical journal of experimental and clinical research · 2015
    Pooled it
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  12. Genes · 2020
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  13. Genes · 2020
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  17. Association of Toll-like receptor 4 single-nucleotide polymorphisms Asp299Gly and Thr399Ile with the risk of primary open angle glaucoma.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Huaicong LongCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Department of Geriatrics, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, Sichuan, P.R. of China.
Brian P O'ConnorCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Integrated Department of Immunology, University of Colorado and National Jewish Health, Denver, Colorado, United States of America.
Rachel L ZemansCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Department of Medicine, University of Colorado Denver, Aurora, Colorado, United States of America.
Xiaofang ZhouDepartment of Geriatrics, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, Sichuan, P.R. of China.
Ivana V YangCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Department of Medicine, University of Colorado Denver, Aurora, Colorado, United States of America.
David A SchwartzCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Integrated Department of Immunology, University of Colorado and National Jewish Health, Denver, Colorado, United States of America; Department of Medicine, University of Colorado Denver, Aurora, Colorado, United States of America.
National Jewish Health · USUniversity of Colorado Denver · USSichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital · CN

Funding

Role of Beta-catenin in Epithelial Repair in Acute Lung InjuryK08HL103772 · NHLBI · NATIONAL JEWISH HEALTH · PI ZEMANS, RACHEL LYNNE · 2010 to 2014
$626k
NHLBI NIH HHS K08 HL103772
6 · The paper itself

Abstract

The common, co-segregating Toll-like receptor 4 (TLR4) non-synonymous single nucleotide polymorphisms (SNPs), Asp299Gly and Thr399Ile, are associated with hyporesponsiveness to inhaled lipopolysaccharide (LPS) and increased susceptibility to Gram negative pathogens in humans. The purpose of this study was to identify the relative contributions of the Asp299Gly and the Thr399Ile variants in inhibiting the function of TLR4. 293/hMD2-CD14 cell line was transfected with lentiviral constructs containing human wild type (WT) TLR4-EGFP or TLR4-EGFP with Asp299Gly, Thr399Ile or Asp299Gly/Thr399Ile complementary DNA (cDNA). Multiple stable cell lines were established for each construct: three for WT TLR4, Asp299Gly, and Thr399Ile, and only two for Asp299Gly/Thr399Ile mutants and EGFP control. We did not observe a significant effect of polymorphisms on cell surface and intracellular TLR4 expression nor were there any significant differences in TLR4 and EGFP protein levels assessed by Western blotting and confocal microscopy among the multiple cell lines of each of the constructs. All cell lines had a dose-dependent responsiveness to LPS stimulation. However, compared to the WT TLR4, cells expressing TLR4 with Asp299Gly but not Thr399Ile polymorphism produced significantly less (P<0.05) IL-8 following LPS stimulation. Similarly, cells expressing TLR4 Asp299Gly but not Thr399Ile allele had significantly lower percentage of phosphorylated and total NF-κB P65 following LPS stimulation. While we could not do statistics on the Asp299Gly/Thr399Ile group, we observed a reduced responsiveness to LPS compared to WT TLR4. Taken together, we observed that the TLR4 Asp299Gly variant, but not the Thr399Ile variant, is responsible for impaired responsiveness of TLR4 to LPS and corresponding activation of NF-κB.

Indexed as

Polymorphism, GeneticSignal TransductionAspartic AcidCell LineGlycineHumansIsoleucineNF-kappa BThreonineToll-Like Receptor 4Aspartic AcidGlycineIsoleucineNF-kappa BThreonineToll-Like Receptor 4

Identifiers

PMID24695807
PMCPMC3973565
OpenAlexW2035385604

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.