Evidence map›Paper›PMID 24694583›Full record

ArticleJournal of theoretical biology2014

Noise-induced dispersion and breakup of clusters in cell cycle dynamics.

Xue Gong, Gregory Moses, Alexander B Neiman, Todd Young

Abstract read
In one paragraph

Article in Journal of theoretical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xue GongMathematics, Ohio University, Athens, OH, USA.
Gregory MosesMathematics, Ohio University, Athens, OH, USA.
Alexander B NeimanDepartment of Physics and Astronomy, Ohio University, Athens, OH, USA. Electronic address: neimana@ohio.edu.
Todd YoungMathematics, Ohio University, Athens, OH, USA. Electronic address: youngt@ohio.edu.

Funding

Dynamics and Bifurcations of Population Structures Induced by Cell Cycle FeedbackR01GM090207 · NIGMS · VANDERBILT UNIVERSITY · PI BOCZKO, ERIK MIKLOS · 2009 to 2012
$1.2M
NIGMS NIH HHS R01 GM090207NIGMS NIH HHS R01GM090207
6 · The paper itself

Abstract

We study the effects of random perturbations on collective dynamics of a large ensemble of interacting cells in a model of the cell division cycle. We consider a parameter region for which the unperturbed model possesses asymptotically stable two-cluster periodic solutions. Two biologically motivated forms of random perturbations are considered: bounded variations in growth rate and asymmetric division. We compare the effects of these two dispersive mechanisms with additive Gaussian white noise perturbations. We observe three distinct phases of the response to noise in the model. First, for weak noise there is a linear relationship between the applied noise strength and the dispersion of the clusters. Second, for moderate noise strengths the clusters begin to mix, i.e. individual cells move between clusters, yet the population distribution clearly continues to maintain a two-cluster structure. Third, for strong noise the clusters are destroyed and the population is characterized by a uniform distribution. The second and third phases are separated by an order-disorder phase transition that has the characteristics of a Hopf bifurcation. Furthermore, we show that for the cell cycle model studied, the effects of bounded random perturbations are virtually indistinguishable from those induced by additive Gaussian noise, after appropriate scaling of the variance of noise strength. We then use the model to predict the strength of coupling among the cells from experimental data. In particular, we show that coupling must be rather strong to account for the observed clustering of cells given experimentally estimated noise variance.

Indexed as

Models, BiologicalSignal-To-Noise RatioCell CycleOrder–disorder transitionYeast metabolic oscillations

Identifiers

PMID24694583
PMCPMC4058369

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.