Evidence map›Paper›PMID 24693539›Full record

ArticleBioMed research international2014

TET2 overexpression in chronic lymphocytic leukemia is unrelated to the presence of TET2 variations.

María Hernández-Sánchez, Ana Eugenia Rodríguez, Alexander Kohlmann, Rocío Benito, Juan Luis García, Alberto Risueño, Encarna Fermiñán, Javier De Las Rivas, Marcos González, Jesús-María Hernández-Rivas

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  4. Targeted massively parallel sequencing of mature lymphoid neoplasms: assessment of empirical application and diagnostic utility in routine clinical practice.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

María Hernández-SánchezIBSAL, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Ana Eugenia RodríguezIBSAL, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Alexander KohlmannDepartment of Molecular Genetics, MLL Munich Leukemia Laboratory, 81377 Munich, Germany.
Rocío BenitoIBSAL, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Juan Luis GarcíaInstituto de Estudios de Ciencias de la Salud de Castilla y León (IECSCYL) and Hospital Clínico Universitario de Salamanca (HUSAL), 37007 Castilla y León, Spain.
Alberto RisueñoCelgene Institute for Translational Research Europe (CITRE), 41092 Sevilla, Spain ; Unidad de Bioinformática y Genómica Funcional, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Encarna FermiñánUnidad de Genómica, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Javier De Las RivasUnidad de Bioinformática y Genómica Funcional, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain.
Marcos GonzálezIBSAL, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain ; Servicio de Hematología y Departamento de Medicina, Hospital Clínico Universitario de Salamanca, Paseo San Vicente 58, 37007 Salamanca, Spain.
Jesús-María Hernández-RivasIBSAL, IBMCC, Centro de Investigación del Cáncer, Universidad de Salamanca-CSIC, 37007 Salamanca, Spain ; Servicio de Hematología y Departamento de Medicina, Hospital Clínico Universitario de Salamanca, Paseo San Vicente 58, 37007 Salamanca, Spain.
Universidad de Salamanca · ESInstituto de Investigación Biomédica de Salamanca · ESComplejo Hospitalario de Salamanca · ESInstituto de Estudios de Ciencias de la Salud de Castilla y León · ESMunich Leukemia Laboratory (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TET2 is involved in a variety of hematopoietic malignancies, mainly in myeloid malignancies. Most mutations of TET2 have been identified in myeloid disorders, but some have also recently been described in mature lymphoid neoplasms. In contrast to the large amount of data about mutations of TET2, some data are available for gene expression. Moreover, the role of TET2 in chronic lymphocytic leukemia (CLL) is unknown. This study analyzes both TET2 expression and mutations in 48 CLL patients. TET2 expression was analyzed by exon arrays and quantitative real-time polymerase chain reaction (qRT-PCR). Next-generation sequencing (NGS) technology was applied to investigate the presence of TET2 variations. Overexpression of TET2 was observed in B-cell lymphocytes from CLL patients compared with healthy donors (P = 0.004). In addition, in CLL patients, an overexpression of TET2 was also observed in the clonal B cells compared with the nontumoral cells (P = 0.002). However, no novel mutations were observed. Therefore, overexpression of TET2 in CLL seems to be unrelated to the presence of genomic TET2 variations.

Indexed as

AdultAgedAged, 80 and overB-LymphocytesCase-Control StudiesClone CellsDioxygenasesDNA-Binding ProteinsFemaleGene Expression Regulation, LeukemicHigh-Throughput Nucleotide SequencingHumansLeukemia, Lymphocytic, Chronic, B-CellMaleMiddle AgedMutationDioxygenasesDNA-Binding ProteinsProto-Oncogene ProteinsTET2 protein, human

Identifiers

PMID24693539
PMCPMC3947698
OpenAlexW2020421294

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.