Evidence map›Paper›PMID 24692564›Full record

ArticleThe Journal of biological chemistry2014

Suppressor mutations suggest a surface on PAT-4 (Integrin-linked Kinase) that interacts with UNC-112 (Kindlin).

Hiroshi Qadota, Yating Luo, Yohei Matsunaga, Angela S Park, Kim M Gernert, Guy M Benian

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. ILK binding to β1 integrin is indirect and mediated by kindlin-2.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Kindlins as modulators of breast cancer progression.Journal of breast cancer research · 2021
    Article
  4. Article
  5. Article
  6. Chapter 22: Structural and signaling functions of integrins.Biochimica et biophysica acta. Biomembranes · 2020
    Review
  7. Review
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hiroshi QadotaFrom the Department of Pathology, Emory University, Atlanta, Georgia 30322 and.
Yating LuoFrom the Department of Pathology, Emory University, Atlanta, Georgia 30322 and.
Yohei MatsunagaFrom the Department of Pathology, Emory University, Atlanta, Georgia 30322 and.
Angela S ParkFrom the Department of Pathology, Emory University, Atlanta, Georgia 30322 and.
Kim M Gernertthe Biomolecular Computing Resource, Emory University, Atlanta, Georgia 30322.
Guy M BenianFrom the Department of Pathology, Emory University, Atlanta, Georgia 30322 and pathgb@emory.edu.
Emory University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caenorhabditis elegans striated muscle cells attach to basement membrane and transmit the force of muscle contraction through integrin adhesion complexes. The cytoplasmic tail of β-integrin (PAT-3) is associated with a conserved four-protein complex that includes UNC-112 (kindlin), PAT-4 (integrin-linked kinase), PAT-6 (α-parvin/actopaxin), and UNC-97 (PINCH). The proper localization of UNC-112 to muscle integrin adhesion sites requires PAT-4. A recent report (Qadota, H., Moerman, D. G., and Benian, G. M. (2012) A molecular mechanism for the requirement of PAT-4 (integrin-linked kinase (ILK)) for the localization of UNC-112 (kindlin) to integrin adhesion sites. J. Biol. Chem. 287, 28537-28551) suggests a possible molecular mechanism for this requirement: that UNC-112 exists in closed inactive and open active conformations, and conversion to the open active form is promoted by binding to PAT-4 (ILK). Previously, we also reported identification of a single missense mutation in UNC-112, D382V, which abolishes both binding to PAT-4 and normal localization to integrin adhesion sites in vivo. In this report, we describe isolation and characterization of PAT-4 missense mutations that permit binding with UNC-112 D382V and place nine affected residues on a homology model of PAT-4. These nine residues cluster in two regions on the surface of PAT-4, do not overlap the likely binding surface for PAT-6 (α-parvin), and therefore may reside along the interaction surface of PAT-4 for UNC-112 (kindlin). We also show that one of these PAT-4 mutations restores the ability of UNC-112 D382V to localize to integrin adhesions and participate in complex formation.

Indexed as

Caenorhabditis elegansSuppression, GeneticAmino Acid SequenceAnimalsCaenorhabditis elegans ProteinsCell Adhesion MoleculesIntegrinsModels, MolecularMolecular Sequence DataMutation, MissenseProtein BindingProtein ConformationProtein Serine-Threonine KinasesProtein TransportScaffold Protein ILKCaenorhabditis elegans ProteinsCell Adhesion MoleculesIntegrinsPAT-4 protein, C elegansProtein Serine-Threonine KinasesScaffold Protein ILKUNC-112 protein, C elegansAdhesionC. elegansIntegrin-linked KinaseKindlinMuscleProtein-Protein InteractionsProtein StructureSuppressor Genetics

Identifiers

PMID24692564
PMCPMC4022890
OpenAlexW2056517415

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.