Evidence map›Paper›PMID 24692540›Full record

ArticleThe Journal of biological chemistry2014

Atomic basis for the species-specific inhibition of αV integrins by monoclonal antibody 17E6 is revealed by the crystal structure of αVβ3 ectodomain-17E6 Fab complex.

Bhuvaneshwari Mahalingam, Johannes F Van Agthoven, Jian-Ping Xiong, José Luis Alonso, Brian D Adair, Xianliang Rui, Saurabh Anand, Mehrdad Mehrbod, Mohammad R K Mofrad, Christa Burger and 2 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  7. Cell adhesion in cancer: Beyond the migration of single cells.The Journal of biological chemistry · 2020
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Activation mechanisms of αVβ3 integrin by binding to fibronectin: A computational study.Protein science : a publication of the Protein Society · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Bhuvaneshwari MahalingamFrom the Structural Biology Program and.
Johannes F Van AgthovenFrom the Structural Biology Program and.
Jian-Ping XiongFrom the Structural Biology Program and.
José Luis Alonsothe Leukocyte Biology and Inflammation Program, Departments of Medicine and Developmental & Regenerative Biology, Massachusetts General Hospital and Harvard Medical School, Charlestown, Massachusetts 02129.
Brian D AdairFrom the Structural Biology Program and.
Xianliang Ruithe Leukocyte Biology and Inflammation Program, Departments of Medicine and Developmental & Regenerative Biology, Massachusetts General Hospital and Harvard Medical School, Charlestown, Massachusetts 02129.
Saurabh Anandthe Leukocyte Biology and Inflammation Program, Departments of Medicine and Developmental & Regenerative Biology, Massachusetts General Hospital and Harvard Medical School, Charlestown, Massachusetts 02129.
Mehrdad Mehrbodthe Departments of Bioengineering and Mechanical Engineering, University of California, Berkeley, California 94720.
Mohammad R K Mofradthe Departments of Bioengineering and Mechanical Engineering, University of California, Berkeley, California 94720.
Christa BurgerMerck KGaA and Discovery Technologies, Molecular Pharmacology, and.
Simon L GoodmanMerck KGaA and Therapeutic Innovation Platform, Oncology, Darmstadt 64271, Germany.
M Amin ArnaoutFrom the Structural Biology Program and the Leukocyte Biology and Inflammation Program, Departments of Medicine and Developmental & Regenerative Biology, Massachusetts General Hospital and Harvard Medical School, Charlestown, Massachusetts 02129, aarnaout1@mgh.harvard.edu.

Funding

TRAINING IN CELL STRUCTURE AND FUNCTION IN NEPHROLOGYT32DK007540 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI BROWN, DENNIS, SOBERMAN, ROY · 1986 to 2021
$7.2M
Structure and Function of Integrins in the KidneyR01DK088327 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2010 to 2025
$5.3M
Identification of Novel integrin antagonistsR21DK096334 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2012 to 2013
$534k
NIDDK NIH HHS DK007540NIDDK NIH HHS DK088327NIDDK NIH HHS DK096334NIDDK NIH HHS R01 DK088327NIDDK NIH HHS R21 DK096334NIDDK NIH HHS T32 DK007540
6 · The paper itself

Abstract

The function-blocking, non-RGD-containing, and primate-specific mouse monoclonal antibody 17E6 binds the αV subfamily of integrins. 17E6 is currently in phase II clinical trials for treating cancer. To elucidate the structural basis of recognition and the molecular mechanism of inhibition, we crystallized αVβ3 ectodomain in complex with the Fab fragment of 17E6. Protein crystals grew in presence of the activating cation Mn(2+). The integrin in the complex and in solution assumed the genuflected conformation. 17E6 Fab bound exclusively to the Propeller domain of the αV subunit. At the core of αV-Fab interface were interactions involving Propeller residues Lys-203 and Gln-145, with the latter accounting for primate specificity. The Propeller residue Asp-150, which normally coordinates Arg of the ligand Arg-Gly-Asp motif, formed contacts with Arg-54 of the Fab that were expected to reduce soluble FN10 binding to cellular αVβ3 complexed with 17E6. This was confirmed in direct binding studies, suggesting that 17E6 is an allosteric inhibitor of αV integrins.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalCell LineCrystallography, X-RayHumansImmunoglobulin Fab FragmentsIntegrin alphaVIntegrin alphaVbeta3ManganeseModels, MolecularMolecular Sequence DataPrimatesProtein Structure, TertiarySpecies SpecificityAntibodies, MonoclonalImmunoglobulin Fab FragmentsIntegrin alphaVIntegrin alphaVbeta3ManganeseCancer TherapyCell AdhesionCell Surface ReceptorCrystal StructureExtracellular Matrix ProteinsFibronectinIntegrins

Identifiers

PMID24692540
PMCPMC4022854

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.