Evidence map›Paper›PMID 24690904›Full record

ArticlePlant signaling & behavior2014

The LNK1 night light-inducible and clock-regulated gene is induced also in response to warm-night through the circadian clock nighttime repressor in Arabidopsis thaliana.

Takeshi Mizuno, Aya Takeuchi, Yuichi Nomoto, Norihito Nakamichi, Takafumi Yamashino

Open access · hybridAbstract read
In one paragraph

Article in Plant signaling & behavior, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Warm nights disrupt transcriptome rhythms in field-grown rice panicles.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Molecular mechanisms at the core of the plant circadian oscillator.Nature structural & molecular biology · 2016
    Review
  14. Time-dependent sequestration of RVE8 by LNK proteins shapes the diurnal oscillation of anthocyanin biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Takeshi MizunoLaboratory of Molecular and Functional Genomics; School of Agriculture; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan.
Aya TakeuchiLaboratory of Molecular and Functional Genomics; School of Agriculture; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan.
Yuichi NomotoLaboratory of Molecular and Functional Genomics; School of Agriculture; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan.
Norihito NakamichiLaboratory of Molecular and Functional Genomics; School of Agriculture; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan; Institute of Transformative Bio-Molecules; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan.
Takafumi YamashinoLaboratory of Molecular and Functional Genomics; School of Agriculture; Nagoya University; Furocho, Chikusa-ku, Nagoya, Japan.
Nagoya University · JPGenomics (United Kingdom) · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ambient temperature has two fundamental impacts on the Arabidopsis circadian clock system in the processes referred to as temperature compensation and entrainment, respectively. These temperature-related longstanding problems have not yet been fully clarified. Recently, we provided evidence that temperature signals feed into the clock transcriptional circuitry through the evening complex (EC) nighttime repressor composed of LUX-ELF3-ELF4, and that the transcription of PRR9, PRR7, GI and LUX is commonly regulated through the nighttime repressor in response to both moderate changes in temperature (∆6 °C) and differences in steady-state growth-compatible temperature (16 °C to 28 °C). These temperature-associated characteristics of the core clock genes might be relevant to the fundamental oscillator functions. Here, we further show that the recently identified LNK1 night light-inducible and clock-controlled gene, which actually has a robust peak at daytime, is induced also by warm-night through the EC nighttime repressor in a manner very similar to PRR7, which is also night light-inducible daytime gene. Based on these findings, a hypothetical view is proposed with regard to the temperature entrainment of the central oscillator.

Indexed as

Circadian ClocksGene Expression Regulation, PlantArabidopsisArabidopsis ProteinsDarknessGenes, PlantPromoter Regions, GeneticTemperatureTranscription FactorsArabidopsis ProteinsAt2g25930 protein, ArabidopsisELF4 protein, ArabidopsisLux Arrhythmo protein, ArabidopsisTranscription FactorsArabidopsis thalianacircadian clockpseudo-response regulatortemperature responsetranscription circuitry

Identifiers

PMID24690904
PMCPMC4091318
OpenAlexW2008368591

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.