Evidence map›Paper›PMID 24683206›Full record

ArticleCurrent therapeutic research, clinical and experimental2007

Prevalence of Helicobacter pylori in symptomatic patients and detection of clarithromycin resistance using melting curve analysis.

Ayse Demet Kaya, C Elif Oztürk, Yusuf Akcan, Mustafa Behçet, A Esra Karakoç, Mihriban Yücel, Müge Mısırlıoglu, Serdar Tuncer

Open access · goldAbstract read
In one paragraph

Article in Current therapeutic research, clinical and experimental, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact, top 84% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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  4. Antibiotic Resistance and Therapeutic Efficacy ofAntibiotics (Basel, Switzerland) · 2023
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ayse Demet KayaDepartment of Microbiology, Duzce University, Medical Faculty Hospital, Konuralp/Duzce, Turkey.
C Elif OztürkDepartment of Microbiology, Duzce University, Medical Faculty Hospital, Konuralp/Duzce, Turkey.
Yusuf AkcanDepartment of Gastroenterology, Duzce University, Medical Faculty Hospital, Konuralp/Duzce, Turkey.
Mustafa BehçetDepartment of Microbiology, Duzce University, Medical Faculty Hospital, Konuralp/Duzce, Turkey.
A Esra KarakoçDepartment of Microbiology, Ministry of Health, Ankara Training and Research Hospital, Ankara, Turkey.
Mihriban YücelDepartment of Microbiology, Ministry of Health, Ankara Training and Research Hospital, Ankara, Turkey.
Müge MısırlıogluMetis Biotechnology Laboratory, Ankara, Turkey.
Serdar TuncerMetis Biotechnology Laboratory, Ankara, Turkey.
Düzce Üniversitesi · TRMinistry of Health · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledAbstract.

backgroundClarithromycin is often a component of combination therapies for Helicobacter pylori eradication; however, increases in resistance rates have decreased the success of the treatment.

objectiveThis study was designed to determine the prevalence of H pylori infection in symptomatic patients and to detect clarithromycin resistance rates using melting curve analysis.

methodsPatients scheduled for upper endoscopy at the Endoscopy Unit of the Department of Gastroenterology, Duzce University, Medical Faculty Hospital, Konuralp/Duzce, Turkey, were assessed for enrollment in the study. Two pairs of gastric biopsy specimens (antrum and corpus) were obtained from each study patient. Histopathologic examination, rapid urease test, culture, and polymerase chain reaction (PCR) of the specimens were used to identify H pylori infection. Clarithromycin resistance was detected using melting curve analysis.

resultsSeventy-five patients (41 women, 34 men; mean [SD]age, 42.6 [14.5] years [range, 17-70 years]) were included in the study. Using histopathology and rapid urease test, H pylori was detected in 40 (53.3%) of the 75 specimens. H pylori was detected using PCR in 40 (53.3%) specimens and by culture in 10 (13.3%) specimens. The specificity and sensitivity of PCR and culture were interpreted by comparing them with the results of histopathologic examination and urease tests. The specificity and sensitivity of PCR were 68.6% and 72.5%, respectively, and the specificity and sensitivity of culture were 97.1% and 22.5%, respectively. Of the 40 isolates, 21 (52.5%) were susceptible to clarithromycin, 12 (30.0%) were resistant, and a mixed susceptibility pattern was detected in 7 (17.5%) specimens. H pylori isolates from 19 (79.2%) of the 24 patients who had formerly used clarithromycin showed clarithromycin resistance.

conclusionsThe prevalence of H pylori infection was 53.3% for the symptomatic patients in this study, and 47.5% of the isolates showed clarithromycin resistance using melting curve analysis. The PCR-based system used in this study was accurate for the detection of H pylori infection as well as clarithromycin susceptibility testing directly in biopsy specimens.

Indexed as

clarithromycin resistanceHelicobacter pylorimelting curve analysisPCR

Identifiers

PMID24683206
PMCPMC3967324
OpenAlexW2070557594

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.