Evidence map›Paper›PMID 24681886›Full record

ArticleNature structural & molecular biology2014

The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity.

Xinyi Lu, Friedrich Sachs, LeeAnn Ramsay, Pierre-Étienne Jacques, Jonathan Göke, Guillaume Bourque, Huck-Hui Ng

Abstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 247 papers.

0numbers the graph read from it
0cells of the map it votes in
247citing papers in PubMed
55.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

247 citing papers in PubMed, 448 citations in OpenAlex.

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  5. Genomic-microbial coevolution in human development: chromosome 2 fusion, and human accelerated regions.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
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187 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Xinyi LuGene Regulation Laboratory, Genome Institute of Singapore, Singapore.
Friedrich Sachs1] Gene Regulation Laboratory, Genome Institute of Singapore, Singapore. [2] Department of Biochemistry, National University of Singapore, Singapore.
LeeAnn RamsayDepartment of Human Genetics, McGill University, Montréal, Québec, Canada.
Pierre-Étienne Jacques1] Gene Regulation Laboratory, Genome Institute of Singapore, Singapore. [2] Département de Biologie, Université de Sherbrooke, Sherbrooke, Québec, Canada.
Jonathan GökeGene Regulation Laboratory, Genome Institute of Singapore, Singapore.
Guillaume Bourque1] Department of Human Genetics, McGill University, Montréal, Québec, Canada. [2] Génome Québec Innovation Center, McGill University, Montréal, Québec, Canada.
Huck-Hui Ng1] Gene Regulation Laboratory, Genome Institute of Singapore, Singapore. [2] Department of Biochemistry, National University of Singapore, Singapore. [3] Department of Biological Sciences, National University of Singapore, Singapore. [4] School of Biological Sciences, Nanyang Technological University, Singapore.
Genome Institute of Singapore · SGMcGill University · CANational University of Singapore · SG

Funding

Canadian Institutes of Health Research MOP-115090
6 · The paper itself

Abstract

Human endogenous retrovirus subfamily H (HERVH) is a class of transposable elements expressed preferentially in human embryonic stem cells (hESCs). Here, we report that the long terminal repeats of HERVH function as enhancers and that HERVH is a nuclear long noncoding RNA required to maintain hESC identity. Furthermore, HERVH is associated with OCT4, coactivators and Mediator subunits. Together, these results uncover a new role of species-specific transposable elements in hESCs.

Indexed as

Cell LineCell NucleusEmbryonic Stem CellsEndogenous RetrovirusesGene Expression RegulationHumansIn Situ Hybridization, FluorescenceOctamer Transcription Factor-3Pluripotent Stem CellsRNA, Long NoncodingSpecies SpecificityOctamer Transcription Factor-3POU5F1 protein, humanRNA, Long Noncoding

Identifiers

PMID24681886
OpenAlexW2011861577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.