Evidence map›Paper›PMID 24678513›Full record

ArticleBioMed research international2014

SNP rs8099917 in gene IL28B might be associated with risk of chronic infection by HCV but not with response to treatment.

Simone Regina Souza da Silva Conde, Julius Caesar Mendes Soares Monteiro, Bruna Tereza Silva Dos Santos, Nathália Karla Fonseca Filgueiras, Pedro Alves de Almeida Lins, Felipe Bonfim Freitas, Ednelza da Silva Graça, Sâmia Demachki, Marialva Tereza Ferreira de Araújo, Ricardo Ishak and 1 more

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 12 citations in OpenAlex.

  1. Frequencies of anInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Simone Regina Souza da Silva CondeLaboratory of Virology, Institute of Biological Sciences, Federal University of Pará, Guamá 66075-110, Belém, PA, Brazil ; School of Medicine, Institute of Health Sciences, Federal University of Pará, Praça. Camilo Salgado, No. 01, Belém, PA, Brazil.
Julius Caesar Mendes Soares MonteiroSchool of Medicine, Institute of Health Sciences, Federal University of Pará, Praça. Camilo Salgado, No. 01, Belém, PA, Brazil.
Bruna Tereza Silva Dos SantosSchool of Medicine, Institute of Health Sciences, Federal University of Pará, Praça. Camilo Salgado, No. 01, Belém, PA, Brazil.
Nathália Karla Fonseca FilgueirasSchool of Medicine, Institute of Health Sciences, Federal University of Pará, Praça. Camilo Salgado, No. 01, Belém, PA, Brazil.
Pedro Alves de Almeida LinsSchool of Medicine, Institute of Health Sciences, Federal University of Pará, Praça. Camilo Salgado, No. 01, Belém, PA, Brazil.
Felipe Bonfim FreitasLaboratory of Virology, Institute of Biological Sciences, Federal University of Pará, Guamá 66075-110, Belém, PA, Brazil.
Ednelza da Silva GraçaLaboratory of Virology, Institute of Biological Sciences, Federal University of Pará, Guamá 66075-110, Belém, PA, Brazil.
Sâmia DemachkiService of Anatomic Pathology, School of Medicine, João de Barros Barreto University Hospital, Federal University of Pará, Belém, PA, Brazil.
Marialva Tereza Ferreira de AraújoService of Anatomic Pathology, School of Medicine, João de Barros Barreto University Hospital, Federal University of Pará, Belém, PA, Brazil.
Ricardo IshakLaboratory of Virology, Institute of Biological Sciences, Federal University of Pará, Guamá 66075-110, Belém, PA, Brazil.
Antonio Carlos Rosário VallinotoLaboratory of Virology, Institute of Biological Sciences, Federal University of Pará, Guamá 66075-110, Belém, PA, Brazil.
Universidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimThe aim of this study was to characterize the genetic profile of patients with chronic hepatitis C virus (HCV) infection relative to polymorphisms rs12979860 and rs8099917 in gene IL28B and the association of those polymorphisms with the response to treatment with pegylated interferon and ribavirin, performed at a reference center in Brazilian Amazonia.

methodsA total of 75 individuals with chronic hepatitis C and 98 healthy individuals from both genders over 18 years old were assessed. DNA samples were collected from leukocytes and subjected to real-time polymerase chain reaction to genotype polymorphisms rs12979860 and rs8099917.

resultsAnalysis of the allelic and genotypic frequencies of the investigated polymorphisms showed that both groups were in Hardy-Weinberg equilibrium; polymorphism rs12979860 exhibited no significant difference between the groups. For polymorphism rs8099917, allele T was significantly less frequent (P = 0.0195) among the patients (63.3%) than the controls (75.5%), and the patients were 1.7 times as likely to exhibit allele G. No difference in response to treatment was associated with SNP patterns.

conclusionThe results suggest a possible association of SNP rs8099917 with higher odds of chronic HCV infection but do not indicate a putative influence of the investigated SNPs on the sustained virologic response.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseCase-Control StudiesFemaleFollow-Up StudiesGene FrequencyHepacivirusHepatitis C, ChronicHumansInterferon LambdaInterferonsInterleukinsMaleMiddle AgedPolymorphism, Single NucleotideRibavirinInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsRibavirin

Identifiers

PMID24678513
PMCPMC3942284
OpenAlexW1983566753

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.