Evidence map›Paper›PMID 24676022›Full record

ArticlePLoS genetics2014

Heterozygous de novo and inherited mutations in the smooth muscle actin (ACTG2) gene underlie megacystis-microcolon-intestinal hypoperistalsis syndrome.

Michael F Wangler, Claudia Gonzaga-Jauregui, Tomasz Gambin, Samantha Penney, Timothy Moss, Atul Chopra, Frank J Probst, Fan Xia, Yaping Yang, Steven Werlin and 14 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
20.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Cellular and molecular basis of proximal small intestine disorders.Nature reviews. Gastroenterology & hepatology · 2024
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. The genetics and pathogenesis of CAKUT.Nature reviews. Nephrology · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Journal of neurogastroenterology and motility · 2022
    Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 3 countries.

Michael F WanglerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America.
Claudia Gonzaga-JaureguiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Tomasz GambinDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Institute of Computer Science, Warsaw University of Technology, Warsaw, Poland.
Samantha PenneyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Timothy MossDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Atul ChopraDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Frank J ProbstDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America.
Fan XiaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Yaping YangDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Steven WerlinDepartment of Pediatrics, Medical College of Wisconsin, Milwaukee, Wisconsin, United States of America.
Ieva EgliteChildren's Clinical University Hospital, Riga, Latvia.
Liene KornejevaChildren's Clinical University Hospital, Riga, Latvia.
Carlos A BacinoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America.
Dustin BaldridgeDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Jeff NeulDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America; Department of Pediatrics, Baylor College of Medicine, Houston, Texas, United States of America.
Efrat Lev LehmanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Austin LarsonDepartment of Genetics, Children's Hospital Colorado, Aurora, Colorado.
Joke BeutenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Donna M MuznyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America.
Shalini JhangianiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor-Hopkins Center for Mendelian Genomics
Richard A GibbsDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America.
James R LupskiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America.
Arthur BeaudetDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Texas Children's Hospital, Houston, Texas, United States of America.
Baylor College of Medicine · USBaylor Genetics · USChildren's Clinical University Hospital · LVTexas Children's Hospital · USChildren's Hospital Colorado · USMedical College of Wisconsin · US

Funding

The Human Genome Sequencing CenterU54HG003273 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI GIBBS, RICHARD A · 2004 to 2015
$341.3M
Baylor-Johns Hopkins Center for Mendelian GeneticsU54HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2012 to 2015
$15.6M
MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
Nonrecurrent rearrangements, genome architecture and neurodegenerative disease.R01NS058529 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 2009 to 2017
$5.0M
Genomic medicine and gene function implementation for an underserved populationR01HG011795 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J, WANGLER, MICHAEL FRANCIS · 2021 to 2025
$4.8M
Neuronal Mechanisms of Peroxisomal Biogenesis Defects in DrosophilaK08NS076547 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI WANGLER, MICHAEL FRANCIS · 2011 to 2015
$729k
NHGRI NIH HHS R01 HG011795NHGRI NIH HHS U54 HG003273NHGRI NIH HHS U54 HG006542NIGMS NIH HHS T32 GM007526NINDS NIH HHS K08 NS076547NINDS NIH HHS NS076547NINDS NIH HHS R01 NS058529Wellcome Trust
6 · The paper itself

Abstract

Megacystis-microcolon-intestinal hypoperistalsis syndrome (MMIHS) is a rare disorder of enteric smooth muscle function affecting the intestine and bladder. Patients with this severe phenotype are dependent on total parenteral nutrition and urinary catheterization. The cause of this syndrome has remained a mystery since Berdon's initial description in 1976. No genes have been clearly linked to MMIHS. We used whole-exome sequencing for gene discovery followed by targeted Sanger sequencing in a cohort of patients with MMIHS and intestinal pseudo-obstruction. We identified heterozygous ACTG2 missense variants in 15 unrelated subjects, ten being apparent de novo mutations. Ten unique variants were detected, of which six affected CpG dinucleotides and resulted in missense mutations at arginine residues, perhaps related to biased usage of CpG containing codons within actin genes. We also found some of the same heterozygous mutations that we observed as apparent de novo mutations in MMIHS segregating in families with intestinal pseudo-obstruction, suggesting that ACTG2 is responsible for a spectrum of smooth muscle disease. ACTG2 encodes γ2 enteric actin and is the first gene to be clearly associated with MMIHS, suggesting an important role for contractile proteins in enteric smooth muscle disease.

Indexed as

HeterozygoteAbnormalities, MultipleActinsAdolescentAdultChildChild, PreschoolColonExomeFemaleHumansIntestinal Pseudo-ObstructionMaleMuscle, SmoothMutationUrinary BladderACTG2 protein, humanActins

Identifiers

PMID24676022
PMCPMC3967950
OpenAlexW2031027239

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.