Evidence map›Paper›PMID 24674670›Full record

ArticleBMC biology2014

LIM homeodomain transcription factor Isl1 directs normal pyloric development by targeting Gata3.

Yushan Li, Jirong Pan, Chao Wei, Juan Chen, Ying Liu, Jiali Liu, Xiaoxin Zhang, Sylvia M Evans, Yan Cui, Sheng Cui

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Generation ofG3 (Bethesda, Md.) · 2019
    Article
  7. Article
  8. Article
  9. Translating Developmental Principles to Generate Human Gastric Organoids.Cellular and molecular gastroenterology and hepatology · 2018
    Review
  10. Article
  11. Review
  12. Roles for Nkx2-5 and Gata3 in the ontogeny of the murine smooth muscle gastric ligaments.American journal of physiology. Gastrointestinal and liver physiology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Yushan Li
Jirong Pan
Chao Wei
Juan Chen
Ying Liu
Jiali Liu
Xiaoxin Zhang
Sylvia M Evans
Yan CuiState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, People's Republic of China. dryancui@yahoo.com.cn.
Sheng Cui
China Agricultural University · CNBeijing Chao-Yang Hospital · CNUniversity of Montana · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAbnormalities in pyloric development or in contractile function of the pylorus cause reflux of duodenal contents into the stomach and increase the risk of gastric metaplasia and cancer. Abnormalities of the pyloric region are also linked to congenital defects such as the relatively common neonatal hypertrophic pyloric stenosis, and primary duodenogastric reflux. Therefore, understanding pyloric development is of great clinical relevance. Here, we investigated the role of the LIM homeodomain transcription factor Isl1 in pyloric development.

resultsExamination of Isl1 expression in developing mouse stomach by immunohistochemistry, whole mount in situ hybridization and real-time quantitative PCR demonstrated that Isl1 is highly expressed in developing mouse stomach, principally in the smooth muscle layer of the pylorus. Isl1 expression was also examined by immunofluorescence in human hypertrophic pyloric stenosis where the majority of smooth muscle cells were found to express Isl1. Isl1 function in embryonic stomach development was investigated utilizing a tamoxifen-inducible Isl1 knockout mouse model. Isl1 deficiency led to nearly complete absence of the pyloric outer longitudinal muscle layer at embryonic day 18.5, which is consistent with Gata3 null mouse phenotype. Chromatin immunoprecipitation, luciferase assays, and electrophoretic mobility shift assays revealed that Isl1 ensures normal pyloric development by directly targeting Gata3.

conclusionsThis study demonstrates that the Isl1-Gata3 transcription regulatory axis is essential for normal pyloric development. These findings are highly clinically relevant and may help to better understand pathways leading to pyloric disease.

Indexed as

ActinsAnimalsApoptosisCell ProliferationCytokinesEnhancer Elements, GeneticFemaleGATA3 Transcription FactorGene Expression Regulation, DevelopmentalHomeobox Protein Nkx-2.5Homeodomain ProteinsHumansIntercellular Signaling Peptides and ProteinsLIM-Homeodomain ProteinsMaleMiceActinsalpha-smooth muscle actin, mouseCytokinesGATA3 Transcription FactorGrem1 protein, mouseHomeobox Protein Nkx-2.5Homeodomain Proteinsinsulin gene enhancer binding protein Isl-1Intercellular Signaling Peptides and ProteinsLIM-Homeodomain ProteinsNkx2-5 protein, mouseSOX9 Transcription FactorTranscription Factors

Identifiers

PMID24674670
PMCPMC4021819
OpenAlexW2009033332

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.